Description

Ensembl ID ENSCCRG00020005047 Gene ID Accession -
Symbol Alias - Full Name RNA polymerase I subunit B
Status Confidence Length 9037 bases Strand Plus strand
Position SAUJ01039200.1 : 2284909 - 2293945 RNA binding domain RNA_pol_Rpb2_1 , RNA_pol_Rpa2_4 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCCRP00020010715 RNA_pol_Rpb2_1 PF04563 5.6e-35 1
ENSCCRP00020010715 RNA_pol_Rpa2_4 PF06883 2.5e-21 2
ENSCCRP00020010715 RNA_pol_Rpb2_3 PF04565 6e-29 3
ENSCCRP00020010715 RNA_pol_Rpb2_2 PF04561 1.5e-08 4
ENSCCRP00020010708 RNA_pol_Rpb2_1 PF04563 1.4e-34 1
ENSCCRP00020010708 RNA_pol_Rpa2_4 PF06883 4.4e-21 2
ENSCCRP00020010708 RNA_pol_Rpb2_3 PF04565 1.3e-28 3
ENSCCRP00020010708 RNA_pol_Rpb2_7 PF04560 6.1e-21 4
ENSCCRP00020010708 RNA_pol_Rpb2_6 PF00562 4.1e-116 5
ENSCCRP00020010709 RNA_pol_Rpb2_1 PF04563 1.5e-34 1
ENSCCRP00020010709 RNA_pol_Rpb2_3 PF04565 1.2e-28 2
ENSCCRP00020010709 RNA_pol_Rpb2_7 PF04560 4.8e-21 3
ENSCCRP00020010709 RNA_pol_Rpb2_2 PF04561 3.4e-08 4
ENSCCRP00020010709 RNA_pol_Rpb2_6 PF00562 4e-116 5
ENSCCRP00020010707 RNA_pol_Rpb2_1 PF04563 1.5e-34 1
ENSCCRP00020010707 RNA_pol_Rpa2_4 PF06883 4.5e-21 2
ENSCCRP00020010707 RNA_pol_Rpb2_3 PF04565 1.3e-28 3
ENSCCRP00020010707 RNA_pol_Rpb2_7 PF04560 5e-21 4
ENSCCRP00020010707 RNA_pol_Rpb2_2 PF04561 3.4e-08 5
ENSCCRP00020010707 RNA_pol_Rpb2_6 PF00562 4.2e-116 6
ENSCCRP00020010721 RNA_pol_Rpb2_1 PF04563 1.6e-34 1
ENSCCRP00020010721 RNA_pol_Rpa2_4 PF06883 4.5e-21 2
ENSCCRP00020010721 RNA_pol_Rpb2_3 PF04565 1.3e-28 3
ENSCCRP00020010721 RNA_pol_Rpb2_7 PF04560 5.1e-21 4
ENSCCRP00020010721 RNA_pol_Rpb2_2 PF04561 2.9e-08 5
ENSCCRP00020010721 RNA_pol_Rpb2_6 PF00562 4.2e-116 6
ENSCCRP00020010706 RNA_pol_Rpb2_1 PF04563 1.6e-34 1
ENSCCRP00020010706 RNA_pol_Rpa2_4 PF06883 4.5e-21 2
ENSCCRP00020010706 RNA_pol_Rpb2_3 PF04565 1.3e-28 3
ENSCCRP00020010706 RNA_pol_Rpb2_7 PF04560 5.1e-21 4
ENSCCRP00020010706 RNA_pol_Rpb2_2 PF04561 2.9e-08 5
ENSCCRP00020010706 RNA_pol_Rpb2_6 PF00562 4.2e-116 6
ENSCCRP00020010710 RNA_pol_Rpb2_1 PF04563 1.4e-07 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCCRT00020011884 3776 1137aa ENSCCRP00020010706
- ENSCCRT00020011885 3761 1132aa ENSCCRP00020010707
- ENSCCRT00020011886 3731 1122aa ENSCCRP00020010708
- ENSCCRT00020011887 3710 1115aa ENSCCRP00020010709
- ENSCCRT00020011888 803 146aa ENSCCRP00020010710
- ENSCCRT00020011893 2486 707aa ENSCCRP00020010715
- ENSCCRT00020011900 3408 1135aa ENSCCRP00020010721

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020005047

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00020005047

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression