RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSCCRG00020002281 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
SMG7 nonsense mediated mRNA decay factor |
Status |
Confidence |
Length |
16463 bases |
Strand |
Minus strand |
Position |
SAUJ01039845.1 : 275544 - 292006 |
RNA binding domain |
EST1 , EST1_DNA_bind |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSCCRP00020010062 |
EST1 |
PF10374 |
8.1e-20 |
1 |
ENSCCRP00020010062 |
EST1_DNA_bind |
PF10373 |
3.3e-47 |
2 |
ENSCCRP00020009318 |
EST1 |
PF10374 |
8.6e-20 |
1 |
ENSCCRP00020009318 |
EST1_DNA_bind |
PF10373 |
3.6e-47 |
2 |
ENSCCRP00020010548 |
EST1 |
PF10374 |
9e-20 |
1 |
ENSCCRP00020010548 |
EST1_DNA_bind |
PF10373 |
3.3e-36 |
2 |
ENSCCRP00020010402 |
EST1 |
PF10374 |
9.5e-20 |
1 |
ENSCCRP00020010402 |
EST1_DNA_bind |
PF10373 |
9e-43 |
2 |
ENSCCRP00020009812 |
EST1 |
PF10374 |
9.7e-20 |
1 |
ENSCCRP00020009812 |
EST1_DNA_bind |
PF10373 |
9.2e-43 |
2 |
ENSCCRP00020010058 |
EST1 |
PF10374 |
9.9e-20 |
1 |
ENSCCRP00020010058 |
EST1_DNA_bind |
PF10373 |
3.2e-36 |
2 |
ENSCCRP00020010139 |
EST1 |
PF10374 |
1e-19 |
1 |
ENSCCRP00020010139 |
EST1_DNA_bind |
PF10373 |
2.1e-38 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSCCRT00020010387 |
4757 |
1165aa |
ENSCCRP00020009318 |
- |
ENSCCRT00020010909 |
4727 |
1114aa |
ENSCCRP00020009812 |
- |
ENSCCRT00020011171 |
4697 |
1128aa |
ENSCCRP00020010058 |
- |
ENSCCRT00020011175 |
4607 |
1115aa |
ENSCCRP00020010062 |
- |
ENSCCRT00020011255 |
3942 |
1140aa |
ENSCCRP00020010139 |
- |
ENSCCRT00020011539 |
3813 |
1097aa |
ENSCCRP00020010402 |
- |
ENSCCRT00020011705 |
3666 |
1048aa |
ENSCCRP00020010548 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSCCRG00020002281 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSCCRG00020002281 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |