RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSCCRG00020001668 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
SMG5 nonsense mediated mRNA decay factor |
Status |
Confidence |
Length |
14723 bases |
Strand |
Minus strand |
Position |
SAUJ01033143.1 : 12911 - 27633 |
RNA binding domain |
EST1 , PIN_4 , EST1_DNA_bind |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSCCRP00020004816 |
EST1 |
PF10374 |
4e-21 |
1 |
ENSCCRP00020004816 |
PIN_4 |
PF13638 |
1.9e-05 |
2 |
ENSCCRP00020004816 |
EST1_DNA_bind |
PF10373 |
3.1e-35 |
3 |
ENSCCRP00020004613 |
EST1 |
PF10374 |
4.1e-21 |
1 |
ENSCCRP00020004613 |
PIN_4 |
PF13638 |
1.9e-05 |
2 |
ENSCCRP00020004613 |
EST1_DNA_bind |
PF10373 |
2.5e-40 |
3 |
ENSCCRP00020004601 |
EST1 |
PF10374 |
4.1e-21 |
1 |
ENSCCRP00020004601 |
PIN_4 |
PF13638 |
1.9e-05 |
2 |
ENSCCRP00020004601 |
EST1_DNA_bind |
PF10373 |
1.7e-33 |
3 |
ENSCCRP00020004496 |
EST1 |
PF10374 |
4.6e-21 |
1 |
ENSCCRP00020004496 |
PIN_4 |
PF13638 |
9.2e-06 |
2 |
ENSCCRP00020004496 |
EST1_DNA_bind |
PF10373 |
2.8e-40 |
3 |
ENSCCRP00020004417 |
EST1 |
PF10374 |
4.6e-21 |
1 |
ENSCCRP00020004417 |
EST1_DNA_bind |
PF10373 |
7.8e-31 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSCCRT00020005034 |
4258 |
1081aa |
ENSCCRP00020004417 |
- |
ENSCCRT00020005114 |
4255 |
1080aa |
ENSCCRP00020004496 |
- |
ENSCCRT00020005233 |
2985 |
994aa |
ENSCCRP00020004601 |
- |
ENSCCRT00020005251 |
2958 |
985aa |
ENSCCRP00020004613 |
- |
ENSCCRT00020005474 |
2910 |
969aa |
ENSCCRP00020004816 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSCCRG00020001668 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSCCRG00020001668 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |