| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSCCRG00015040065 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
5'-3' exoribonuclease 1 |
| Status |
Confidence |
Length |
18993 bases |
Strand |
Plus strand |
| Position |
SAUI01096722.1 : 2459827 - 2478819 |
RNA binding domain |
SH3_12 , XRN_N , XRN1_D1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSCCRP00015103825 |
SH3_12 |
PF18129 |
2.8e-18 |
1 |
| ENSCCRP00015103825 |
XRN_N |
PF03159 |
8.4e-94 |
2 |
| ENSCCRP00015103825 |
XRN1_D1 |
PF18332 |
2.9e-32 |
3 |
| ENSCCRP00015103970 |
SH3_12 |
PF18129 |
3e-18 |
1 |
| ENSCCRP00015103970 |
XRN_N |
PF03159 |
2.3e-77 |
2 |
| ENSCCRP00015103970 |
XRN1_D1 |
PF18332 |
8.8e-31 |
3 |
| ENSCCRP00015103786 |
SH3_12 |
PF18129 |
3.4e-18 |
1 |
| ENSCCRP00015103786 |
XRN_N |
PF03159 |
8.1e-94 |
2 |
| ENSCCRP00015103786 |
XRN1_D1 |
PF18332 |
3.3e-32 |
3 |
| ENSCCRP00015103755 |
SH3_12 |
PF18129 |
3.5e-18 |
1 |
| ENSCCRP00015103755 |
XRN_N |
PF03159 |
8.2e-94 |
2 |
| ENSCCRP00015103755 |
XRN1_D1 |
PF18332 |
3.3e-32 |
3 |
| ENSCCRP00015103785 |
SH3_12 |
PF18129 |
3.6e-18 |
1 |
| ENSCCRP00015103785 |
XRN_N |
PF03159 |
4.8e-94 |
2 |
| ENSCCRP00015103785 |
XRN1_D1 |
PF18332 |
2.4e-27 |
3 |
| ENSCCRP00015103856 |
XRN_N |
PF03159 |
4.2e-94 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSCCRT00015107099 |
5802 |
1629aa |
ENSCCRP00015103755 |
| - |
ENSCCRT00015107129 |
4578 |
1525aa |
ENSCCRP00015103785 |
| - |
ENSCCRT00015107130 |
4830 |
1609aa |
ENSCCRP00015103786 |
| - |
ENSCCRT00015107169 |
4395 |
1464aa |
ENSCCRP00015103825 |
| - |
ENSCCRT00015107200 |
2874 |
957aa |
ENSCCRP00015103856 |
| - |
ENSCCRT00015107316 |
4362 |
1453aa |
ENSCCRP00015103970 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSCCRG00015040065 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSCCRG00015040065 | | | | | | | | |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |