| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSCCRG00010050417 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
5'-3' exoribonuclease 1 |
| Status |
Confidence |
Length |
19345 bases |
Strand |
Plus strand |
| Position |
SAUK01000040.1 : 3707881 - 3727225 |
RNA binding domain |
SH3_12 , XRN_N , XRN1_D1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSCCRP00010114836 |
SH3_12 |
PF18129 |
3e-18 |
1 |
| ENSCCRP00010114836 |
XRN_N |
PF03159 |
2.3e-77 |
2 |
| ENSCCRP00010114836 |
XRN1_D1 |
PF18332 |
8.7e-31 |
3 |
| ENSCCRP00010114853 |
SH3_12 |
PF18129 |
3e-18 |
1 |
| ENSCCRP00010114853 |
XRN_N |
PF03159 |
8.6e-94 |
2 |
| ENSCCRP00010114853 |
XRN1_D1 |
PF18332 |
1.1e-30 |
3 |
| ENSCCRP00010114849 |
SH3_12 |
PF18129 |
3.2e-18 |
1 |
| ENSCCRP00010114849 |
XRN_N |
PF03159 |
8.3e-94 |
2 |
| ENSCCRP00010114849 |
XRN1_D1 |
PF18332 |
5.4e-29 |
3 |
| ENSCCRP00010114823 |
SH3_12 |
PF18129 |
3.3e-18 |
1 |
| ENSCCRP00010114823 |
XRN_N |
PF03159 |
9.4e-94 |
2 |
| ENSCCRP00010114823 |
XRN1_D1 |
PF18332 |
1.2e-30 |
3 |
| ENSCCRP00010114840 |
SH3_12 |
PF18129 |
3.5e-18 |
1 |
| ENSCCRP00010114840 |
XRN_N |
PF03159 |
8.8e-94 |
2 |
| ENSCCRP00010114840 |
XRN1_D1 |
PF18332 |
5.4e-29 |
3 |
| ENSCCRP00010114814 |
SH3_12 |
PF18129 |
3.7e-18 |
1 |
| ENSCCRP00010114814 |
XRN_N |
PF03159 |
8.8e-94 |
2 |
| ENSCCRP00010114814 |
XRN1_D1 |
PF18332 |
3.4e-32 |
3 |
| ENSCCRP00010114802 |
SH3_12 |
PF18129 |
3.7e-18 |
1 |
| ENSCCRP00010114802 |
XRN_N |
PF03159 |
8.7e-94 |
2 |
| ENSCCRP00010114802 |
XRN1_D1 |
PF18332 |
3.4e-32 |
3 |
| ENSCCRP00010114818 |
SH3_12 |
PF18129 |
3.8e-18 |
1 |
| ENSCCRP00010114818 |
XRN_N |
PF03159 |
5.2e-94 |
2 |
| ENSCCRP00010114818 |
XRN1_D1 |
PF18332 |
2.4e-27 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSCCRT00010127651 |
5545 |
1696aa |
ENSCCRP00010114802 |
| - |
ENSCCRT00010127663 |
5512 |
1685aa |
ENSCCRP00010114814 |
| - |
ENSCCRT00010127667 |
5206 |
1583aa |
ENSCCRP00010114818 |
| - |
ENSCCRT00010127672 |
5203 |
1582aa |
ENSCCRP00010114823 |
| - |
ENSCCRT00010127685 |
4824 |
1454aa |
ENSCCRP00010114836 |
| - |
ENSCCRT00010127689 |
4944 |
1529aa |
ENSCCRP00010114840 |
| - |
ENSCCRT00010127698 |
4812 |
1485aa |
ENSCCRP00010114849 |
| - |
ENSCCRT00010127702 |
4872 |
1505aa |
ENSCCRP00010114853 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSCCRG00010050417 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSCCRG00010050417 | | | | | | | | |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
