Description

Ensembl ID ENSCCRG00010047426 Gene ID Accession -
Symbol Alias - Full Name RNA binding fox-1 homolog 3b
Status Confidence Length 225090 bases Strand Minus strand
Position SAUK01000226.1 : 1514438 - 1739527 RNA binding domain Fox-1_C , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCCRP00010107603 Fox-1_C PF12414 7.5e-42 1
ENSCCRP00010107594 Fox-1_C PF12414 8e-42 1
ENSCCRP00010107594 RRM_1 PF00076 0.00074 2
ENSCCRP00010107585 Fox-1_C PF12414 1.1e-41 1
ENSCCRP00010107585 RRM_1 PF00076 5.8e-18 2
ENSCCRP00010107611 Fox-1_C PF12414 3.3e-41 1
ENSCCRP00010107611 RRM_1 PF00076 6.2e-18 2
ENSCCRP00010107614 Fox-1_C PF12414 3.6e-41 1
ENSCCRP00010107614 RRM_1 PF00076 6.6e-18 2
ENSCCRP00010107623 Fox-1_C PF12414 1.4e-32 1
ENSCCRP00010107623 RRM_1 PF00076 4.5e-18 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCCRT00010119697 1700 357aa ENSCCRP00010107585
- ENSCCRT00010119708 1407 293aa ENSCCRP00010107594
- ENSCCRT00010119717 1353 275aa ENSCCRP00010107603
- ENSCCRT00010119725 1742 371aa ENSCCRP00010107611
- ENSCCRT00010119728 1624 386aa ENSCCRP00010107614
- ENSCCRT00010119742 1715 312aa ENSCCRP00010107623

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00010047426

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00010047426

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression