RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSCCRG00010042532 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
SMG7 nonsense mediated mRNA decay factor |
Status |
Confidence |
Length |
18349 bases |
Strand |
Minus strand |
Position |
SAUK01000640.1 : 162547 - 180895 |
RNA binding domain |
EST1 , EST1_DNA_bind |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSCCRP00010102338 |
EST1 |
PF10374 |
8.2e-20 |
1 |
ENSCCRP00010102338 |
EST1_DNA_bind |
PF10373 |
3.8e-48 |
2 |
ENSCCRP00010102242 |
EST1 |
PF10374 |
8.2e-20 |
1 |
ENSCCRP00010102242 |
EST1_DNA_bind |
PF10373 |
1.6e-41 |
2 |
ENSCCRP00010102208 |
EST1 |
PF10374 |
8.2e-20 |
1 |
ENSCCRP00010102208 |
EST1_DNA_bind |
PF10373 |
1.6e-41 |
2 |
ENSCCRP00010102247 |
EST1 |
PF10374 |
8.3e-20 |
1 |
ENSCCRP00010102247 |
EST1_DNA_bind |
PF10373 |
3.8e-48 |
2 |
ENSCCRP00010102315 |
EST1 |
PF10374 |
8.3e-20 |
1 |
ENSCCRP00010102315 |
EST1_DNA_bind |
PF10373 |
3.8e-48 |
2 |
ENSCCRP00010101970 |
EST1 |
PF10374 |
8.6e-20 |
1 |
ENSCCRP00010101970 |
EST1_DNA_bind |
PF10373 |
4e-48 |
2 |
ENSCCRP00010101986 |
EST1 |
PF10374 |
8.8e-20 |
1 |
ENSCCRP00010101986 |
EST1_DNA_bind |
PF10373 |
4.1e-48 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSCCRT00010113265 |
4454 |
1150aa |
ENSCCRP00010101970 |
- |
ENSCCRT00010113282 |
4432 |
1167aa |
ENSCCRP00010101986 |
- |
ENSCCRT00010113537 |
4412 |
1112aa |
ENSCCRP00010102208 |
- |
ENSCCRT00010113573 |
4406 |
1110aa |
ENSCCRP00010102242 |
- |
ENSCCRT00010113578 |
4282 |
1117aa |
ENSCCRP00010102247 |
- |
ENSCCRT00010113659 |
3993 |
1119aa |
ENSCCRP00010102315 |
- |
ENSCCRT00010113684 |
3951 |
1105aa |
ENSCCRP00010102338 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSCCRG00010042532 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSCCRG00010042532 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |