Description

Ensembl ID ENSCCRG00010025563 Gene ID Accession -
Symbol Alias - Full Name RNA binding fox-1 homolog 3b
Status Confidence Length 227848 bases Strand Minus strand
Position SAUK01000415.1 : 502904 - 730751 RNA binding domain Fox-1_C , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCCRP00010060294 Fox-1_C PF12414 5.2e-42 1
ENSCCRP00010060300 Fox-1_C PF12414 5.7e-42 1
ENSCCRP00010060300 RRM_1 PF00076 7.2e-18 2
ENSCCRP00010060291 Fox-1_C PF12414 5.8e-42 1
ENSCCRP00010060291 RRM_1 PF00076 0.00093 2
ENSCCRP00010060287 Fox-1_C PF12414 6.1e-42 1
ENSCCRP00010060287 RRM_1 PF00076 9.8e-08 2
ENSCCRP00010060277 Fox-1_C PF12414 6.7e-42 1
ENSCCRP00010060277 RRM_1 PF00076 8.3e-18 2
ENSCCRP00010060307 Fox-1_C PF12414 7.1e-42 1
ENSCCRP00010060307 RRM_1 PF00076 8.9e-18 2
ENSCCRP00010060314 Fox-1_C PF12414 2.8e-27 1
ENSCCRP00010060314 RRM_1 PF00076 9.4e-18 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCCRT00010066105 1865 389aa ENSCCRP00010060277
- ENSCCRT00010066115 1811 371aa ENSCCRP00010060287
- ENSCCRT00010066119 1772 358aa ENSCCRP00010060291
- ENSCCRT00010066122 1718 340aa ENSCCRP00010060294
- ENSCCRT00010066128 1270 355aa ENSCCRP00010060300
- ENSCCRT00010066135 3202 403aa ENSCCRP00010060307
- ENSCCRT00010066142 1847 383aa ENSCCRP00010060314

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00010025563

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00010025563

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression