RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCCRG00010016418	Gene ID		Accession	-
Symbol		Alias	-	Full Name	SR-related CTD-associated factor 4b
Status	Confidence	Length	21558 bases	Strand	Minus strand
Position	SAUK01000080.1 : 1322944 - 1344501	RNA binding domain	RRM_1 , CID
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCCRP00010038476	RRM_1	PF00076	4.8e-07	1
ENSCCRP00010038476	CID	PF04818	1.2e-18	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCCRT00010042239	2445	814aa	ENSCCRP00010038476

Gene Model

Click here to download ENSCCRG00010016418's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCCRG00010016418's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCCRG00010016418

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCCRG00010016418

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression