Description

Ensembl ID ENSCCRG00010007245 Gene ID Accession -
Symbol Alias - Full Name symplekin
Status Confidence Length 17252 bases Strand Minus strand
Position SAUK01000055.1 : 5210823 - 5228074 RNA binding domain Symplekin_C , SYMPK_PTA1_N
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCCRP00010016997 Symplekin_C PF12295 2.5e-73 1
ENSCCRP00010016994 Symplekin_C PF12295 2.2e-72 1
ENSCCRP00010016994 SYMPK_PTA1_N PF11935 2.3e-53 2
ENSCCRP00010016985 Symplekin_C PF12295 2.2e-72 1
ENSCCRP00010016985 SYMPK_PTA1_N PF11935 4.3e-52 2
ENSCCRP00010016982 Symplekin_C PF12295 2.2e-72 1
ENSCCRP00010016982 SYMPK_PTA1_N PF11935 5.2e-52 2
ENSCCRP00010016945 Symplekin_C PF12295 2.5e-72 1
ENSCCRP00010016945 SYMPK_PTA1_N PF11935 2.7e-53 2
ENSCCRP00010016999 Symplekin_C PF12295 1.5e-70 1
ENSCCRP00010016999 SYMPK_PTA1_N PF11935 4.2e-52 2
ENSCCRP00010016989 Symplekin_C PF12295 6.4e-55 1
ENSCCRP00010016989 SYMPK_PTA1_N PF11935 2.7e-51 2
ENSCCRP00010017001 Symplekin_C PF12295 1e-19 1
ENSCCRP00010017001 SYMPK_PTA1_N PF11935 3.9e-52 2
ENSCCRP00010017005 SYMPK_PTA1_N PF11935 5e-52 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCCRT00010018446 3998 1251aa ENSCCRP00010016945
- ENSCCRT00010018487 4365 1170aa ENSCCRP00010016982
- ENSCCRT00010018490 4359 1168aa ENSCCRP00010016985
- ENSCCRT00010018494 4311 1152aa ENSCCRP00010016989
- ENSCCRT00010018499 3689 1148aa ENSCCRP00010016994
- ENSCCRT00010018502 2394 513aa ENSCCRP00010016997
- ENSCCRT00010018504 4137 1094aa ENSCCRP00010016999
- ENSCCRT00010018506 3885 1010aa ENSCCRP00010017001
- ENSCCRT00010018510 2898 681aa ENSCCRP00010017005

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00010007245

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00010007245

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression