RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSCCRG00000074058	Gene ID		Accession	-
Symbol	zgc	Alias	-	Full Name	zgc:171480
Status	Confidence	Length	1341 bases	Strand	Plus strand
Position	CAJNDQ010000018.1 : 6984122 - 6985462	RNA binding domain	Mitoc_L55
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCCRP00000147026	Mitoc_L55	PF09776	4.1e-36	1
ENSCCRP00000147026	Mitoc_L55	PF09776	4.1e-36	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
zgc:171480-201	ENSCCRT00000130767	801	151aa	ENSCCRP00000147026

Gene Model

Click here to download ENSCCRG00000074058's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCCRG00000074058's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000043684	99.2481	97.7444	cyprinus_carpio_carpio	ENSCCRP00000147026	87.4172	86.0927

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	46.3576	33.1126	petromyzon_marinus	ENSPMAP00000000948	59.8291	42.735
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	57.6159	43.0464	callorhinchus_milii	ENSCMIP00000047195	74.359	55.5556
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	58.2781	43.7086	latimeria_chalumnae	ENSLACP00000018490	66.6667	50
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	62.9139	54.3046	clupea_harengus	ENSCHAP00000019020	57.2289	49.3976
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	81.457	72.1854	danio_rerio	ENSDARP00000063716	92.4812	81.9549
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	83.4437	82.1192	carassius_auratus	ENSCARP00000097311	96.1832	94.6565
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	68.8742	60.9272	astyanax_mexicanus	ENSAMXP00000042490	79.3893	70.229
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	70.1987	61.5894	ictalurus_punctatus	ENSIPUP00000001783	80.303	70.4545
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	67.5497	59.6026	electrophorus_electricus	ENSEEEP00000003202	77.2727	68.1818
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	62.9139	52.3179	esox_lucius	ENSELUP00000062815	72.5191	60.3053
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	66.8874	55.6291	oncorhynchus_mykiss	ENSOMYP00000060747	77.0992	64.1221
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	57.6159	47.0199	salmo_salar	ENSSSAP00000070828	54.375	44.375
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	64.9007	53.6424	salmo_salar	ENSSSAP00000118002	77.7778	64.2857
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	64.2384	52.3179	salmo_trutta	ENSSTUP00000045734	77.6	63.2
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	64.2384	52.9801	salmo_trutta	ENSSTUP00000092916	71.8519	59.2593
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	57.6159	47.6821	gadus_morhua	ENSGMOP00000020432	60.8392	50.3497
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	56.9536	42.3841	fundulus_heteroclitus	ENSFHEP00000007068	61.8705	46.0432
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	60.2649	45.0331	poecilia_reticulata	ENSPREP00000030014	65	48.5714
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	58.9404	44.3709	xiphophorus_maculatus	ENSXMAP00000007955	63.5714	47.8571
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	58.9404	44.3709	cyclopterus_lumpus	ENSCLMP00005043246	60.1351	45.2703
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	53.6424	41.7219	oryzias_latipes	ENSORLP00000038678	33.3333	25.9259
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	58.2781	44.3709	oreochromis_niloticus	ENSONIP00000051454	66.6667	50.7576
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	59.6026	45.6954	haplochromis_burtoni	ENSHBUP00000025734	65.2174	50
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	59.6026	45.6954	astatotilapia_calliptera	ENSACLP00000007621	65.2174	50
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	60.2649	47.0199	sparus_aurata	ENSSAUP00010056568	65.4676	51.0791
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	62.9139	47.6821	lates_calcarifer	ENSLCAP00010017513	65.9722	50
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	56.2914	39.0728	xenopus_tropicalis	ENSXETP00000105135	63.4328	44.0299
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	54.9669	43.0464	chrysemys_picta_bellii	ENSCPBP00000002195	66.9355	52.4194
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	51.6556	36.4238	crocodylus_porosus	ENSCPRP00005003439	62.4	44
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	54.9669	41.0596	sphenodon_punctatus	ENSSPUP00000000902	66.4	49.6
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	52.9801	35.7616	laticauda_laticaudata	ENSLLTP00000015769	63.4921	42.8571
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	53.6424	35.7616	notechis_scutatus	ENSNSUP00000020160	64.2857	42.8571
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	53.6424	36.4238	pseudonaja_textilis	ENSPTXP00000013853	64.2857	43.6508
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	47.0199	33.1126	gallus_gallus	ENSGALP00010039229	33.1776	23.3645
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	47.6821	31.7881	anas_platyrhynchos_platyrhynchos	ENSAPLP00000025398	16.1435	10.7623
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	43.7086	31.7881	serinus_canaria	ENSSCAP00000007950	51.5625	37.5
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	47.6821	32.4503	meleagris_gallopavo	ENSMGAP00000023585	47.6821	32.4503
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	49.6689	35.7616	ornithorhynchus_anatinus	ENSOANP00000036876	62.5	45
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	45.0331	31.1258	parus_major	ENSPMJP00000004622	53.5433	37.0079
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	58.9404	48.3444	dicentrarchus_labrax	ENSDLAP00005075336	62.6761	51.4085
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	54.3046	41.0596	pelodiscus_sinensis	ENSPSIP00000012059	65.6	49.6
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	54.9669	40.3974	erpetoichthys_calabaricus	ENSECRP00000014262	62.8788	46.2121
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	47.0199	32.4503	erpetoichthys_calabaricus	ENSECRP00000031419	62.2807	42.9825
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	57.6159	45.6954	takifugu_rubripes	ENSTRUP00000063941	64.4444	51.1111
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	57.6159	43.7086	oryzias_melastigma	ENSOMEP00000026395	63.5037	48.1752
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	50.9934	34.4371	naja_naja	ENSNNAP00000013455	46.9512	31.7073
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	58.9404	45.6954	neolamprologus_brichardi	ENSNBRP00000025436	64.4928	50
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	56.2914	40.3974	kryptolebias_marmoratus	ENSKMAP00000002615	66.9291	48.0315
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	52.9801	40.3974	phascolarctos_cinereus	ENSPCIP00000029360	63.4921	48.4127
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	60.9272	47.6821	seriola_dumerili	ENSSDUP00000031367	62.585	48.9796
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	71.5232	64.2384	pygocentrus_nattereri	ENSPNAP00000030534	81.8182	73.4848
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	60.2649	44.3709	poecilia_formosa	ENSPFOP00000012701	65	47.8571
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	59.6026	45.0331	scophthalmus_maximus	ENSSMAP00000008784	66.1765	50
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	55.6291	47.6821	cottoperca_gobio	ENSCGOP00000033214	49.7041	42.6035
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	56.2914	45.0331	labrus_bergylta	ENSLBEP00000020947	67.4603	53.9683
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	56.2914	45.0331	labrus_bergylta	ENSLBEP00000014049	67.4603	53.9683
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	35.7616	25.1656	ficedula_albicollis	ENSFALP00000001120	33.9623	23.8994
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	43.0464	31.7881	ficedula_albicollis	ENSFALP00000026801	54.1667	40
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	59.6026	45.6954	amphilophus_citrinellus	ENSACIP00000002022	66.1765	50.7353
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	59.6026	45.6954	anabas_testudineus	ENSATEP00000065671	61.2245	46.9388
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	54.3046	41.7219	podarcis_muralis	ENSPMRP00000026840	52.5641	40.3846
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	54.3046	41.0596	podarcis_muralis	ENSPMRP00000026800	65.6	49.6
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	66.8874	54.9669	hucho_hucho	ENSHHUP00000086054	77.0992	63.3588
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	50.9934	43.0464	gasterosteus_aculeatus	ENSGACP00000002772	83.6957	70.6522
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	58.2781	49.6689	amphiprion_ocellaris	ENSAOCP00000011798	61.1111	52.0833
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	78.1457	75.4967	sinocyclocheilus_grahami	ENSSGRP00000009619	96.7213	93.4426
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	49.0066	33.1126	coturnix_japonica	ENSCJPP00005012391	65.4867	44.2478
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	66.8874	54.9669	oncorhynchus_tshawytscha	ENSOTSP00005049253	77.0992	63.3588
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	57.6159	49.0066	acanthochromis_polyacanthus	ENSAPOP00000001578	60.4167	51.3889
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	52.3179	37.0861	salvator_merianae	ENSSMRP00000021759	62.2047	44.0945
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	54.9669	41.7219	chelonoidis_abingdonii	ENSCABP00000020107	66.9355	50.8064
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	59.6026	45.6954	maylandia_zebra	ENSMZEP00005020768	65.2174	50
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	58.2781	43.7086	hippocampus_comes	ENSHCOP00000018735	48.3517	36.2637
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	48.3444	34.4371	anser_brachyrhynchus	ENSABRP00000002898	57.9365	41.2698
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	54.3046	38.4106	nothobranchius_furzeri	ENSNFUP00015047503	65.0794	46.0317
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	56.2914	42.3841	oryzias_javanicus	ENSOJAP00000022955	62.0438	46.7153
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	57.6159	48.3444	stegastes_partitus	ENSSPAP00000015381	61.7021	51.773
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	59.6026	40.3974	betta_splendens	ENSBSLP00000026358	60.4027	40.9396
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	58.9404	49.6689	amphiprion_percula	ENSAPEP00000031438	61.8056	52.0833
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	60.2649	46.3576	mastacembelus_armatus	ENSMAMP00000033065	61.9048	47.619
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	60.2649	49.6689	sander_lucioperca	ENSSLUP00000048446	62.3288	51.3699
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	62.9139	44.3709	cynoglossus_semilaevis	ENSCSEP00000030500	68.3453	48.2014
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	60.9272	48.3444	larimichthys_crocea	ENSLCRP00005005552	66.6667	52.8986
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	44.3709	31.7881	strigops_habroptila	ENSSHBP00005003978	26.9076	19.2771
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	58.9404	47.6821	myripristis_murdjan	ENSMMDP00005006023	61.8056	50
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	60.2649	47.0199	seriola_lalandi_dorsalis	ENSSLDP00000025170	61.9048	48.2993
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	57.6159	45.6954	denticeps_clupeoides	ENSDCDP00000009095	62.5899	49.6403
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	55.6291	43.0464	terrapene_carolina_triunguis	ENSTMTP00000010935	67.2	52
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	54.9669	41.7219	oryzias_sinensis	ENSOSIP00000038589	34.2975	26.0331
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	43.7086	31.1258	oryzias_sinensis	ENSOSIP00000008730	42.3077	30.1282
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	44.3709	30.4636	oryzias_sinensis	ENSOSIP00000022998	27.459	18.8525
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	54.9669	42.3841	gopherus_evgoodei	ENSGEVP00005017233	66.4	51.2
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	44.3709	30.4636	aquila_chrysaetos_chrysaetos	ENSACCP00020020258	56.3025	38.6555
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	56.9536	38.4106	leptobrachium_leishanense	ENSLLEP00000046213	64.6617	43.609
ENSCCRG00000074058	cyprinus_carpio_carpio	ENSCCRP00000147026	60.9272	50.3311	paramormyrops_kingsleyae	ENSPKIP00000022947	71.3178	58.9147

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression