RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSCCRG00000023323	Gene ID		Accession	-
Symbol	zgc	Alias	-	Full Name	zgc:171480
Status	Confidence	Length	1418 bases	Strand	Minus strand
Position	CAJNDQ010000024.1 : 20998985 - 21000402	RNA binding domain	Mitoc_L55
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCCRP00000043684	Mitoc_L55	PF09776	6.3e-42	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
zgc:171480-201	ENSCCRT00000047339	801	133aa	ENSCCRP00000043684

Gene Model

Click here to download ENSCCRG00000023323's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCCRG00000023323's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000147026	87.4172	86.0927	cyprinus_carpio_carpio	ENSCCRP00000043684	99.2481	97.7444

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	52.6316	36.8421	petromyzon_marinus	ENSPMAP00000000948	59.8291	41.8803
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	65.4135	48.1203	callorhinchus_milii	ENSCMIP00000047195	74.359	54.7009
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	66.1654	48.8722	latimeria_chalumnae	ENSLACP00000018490	66.6667	49.2424
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	71.4286	61.6541	clupea_harengus	ENSCHAP00000019020	57.2289	49.3976
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	91.7293	81.9549	danio_rerio	ENSDARP00000063716	91.7293	81.9549
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	93.985	90.9774	carassius_auratus	ENSCARP00000097311	95.4198	92.3664
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	78.1955	68.4211	astyanax_mexicanus	ENSAMXP00000042490	79.3893	69.4657
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	79.6992	69.1729	ictalurus_punctatus	ENSIPUP00000001783	80.303	69.697
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	76.6917	67.6692	electrophorus_electricus	ENSEEEP00000003202	77.2727	68.1818
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	71.4286	58.6466	esox_lucius	ENSELUP00000062815	72.5191	59.542
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	75.9398	62.406	oncorhynchus_mykiss	ENSOMYP00000060747	77.0992	63.3588
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	65.4135	52.6316	salmo_salar	ENSSSAP00000070828	54.375	43.75
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	73.6842	60.1504	salmo_salar	ENSSSAP00000118002	77.7778	63.4921
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	72.9323	58.6466	salmo_trutta	ENSSTUP00000045734	77.6	62.4
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	72.9323	60.1504	salmo_trutta	ENSSTUP00000092916	71.8519	59.2593
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	65.4135	52.6316	gadus_morhua	ENSGMOP00000020432	60.8392	48.951
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	63.9098	48.1203	fundulus_heteroclitus	ENSFHEP00000007068	61.1511	46.0432
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	67.6692	51.8797	poecilia_reticulata	ENSPREP00000030014	64.2857	49.2857
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	66.1654	51.1278	xiphophorus_maculatus	ENSXMAP00000007955	62.8571	48.5714
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	66.9173	50.3759	cyclopterus_lumpus	ENSCLMP00005043246	60.1351	45.2703
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	60.9023	46.6165	oryzias_latipes	ENSORLP00000038678	33.3333	25.5144
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	66.1654	49.6241	oreochromis_niloticus	ENSONIP00000051454	66.6667	50
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	67.6692	51.1278	haplochromis_burtoni	ENSHBUP00000025734	65.2174	49.2754
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	67.6692	51.1278	astatotilapia_calliptera	ENSACLP00000007621	65.2174	49.2754
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	67.6692	51.8797	sparus_aurata	ENSSAUP00010056568	64.7482	49.6403
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	71.4286	53.3835	lates_calcarifer	ENSLCAP00010017513	65.9722	49.3056
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	63.9098	45.1128	xenopus_tropicalis	ENSXETP00000105135	63.4328	44.7761
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	61.6541	47.3684	chrysemys_picta_bellii	ENSCPBP00000002195	66.129	50.8064
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	58.6466	40.6015	crocodylus_porosus	ENSCPRP00005003439	62.4	43.2
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	62.406	45.8647	sphenodon_punctatus	ENSSPUP00000000902	66.4	48.8
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	60.1504	39.8496	laticauda_laticaudata	ENSLLTP00000015769	63.4921	42.0635
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	60.9023	39.8496	notechis_scutatus	ENSNSUP00000020160	64.2857	42.0635
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	60.9023	40.6015	pseudonaja_textilis	ENSPTXP00000013853	64.2857	42.8571
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	53.3835	36.8421	gallus_gallus	ENSGALP00010039229	33.1776	22.8972
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	54.1353	35.3383	anas_platyrhynchos_platyrhynchos	ENSAPLP00000025398	16.1435	10.5381
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	49.6241	35.3383	serinus_canaria	ENSSCAP00000007950	51.5625	36.7188
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	54.8872	36.8421	meleagris_gallopavo	ENSMGAP00000023585	48.3444	32.4503
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	56.391	39.8496	ornithorhynchus_anatinus	ENSOANP00000036876	62.5	44.1667
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	51.8797	34.5865	parus_major	ENSPMJP00000004622	54.3307	36.2205
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	66.9173	54.1353	dicentrarchus_labrax	ENSDLAP00005075336	62.6761	50.7042
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	60.9023	46.6165	pelodiscus_sinensis	ENSPSIP00000012059	64.8	49.6
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	62.406	45.8647	erpetoichthys_calabaricus	ENSECRP00000014262	62.8788	46.2121
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	53.3835	36.8421	erpetoichthys_calabaricus	ENSECRP00000031419	62.2807	42.9825
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	65.4135	50.3759	takifugu_rubripes	ENSTRUP00000063941	64.4444	49.6296
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	65.4135	48.8722	oryzias_melastigma	ENSOMEP00000026395	63.5037	47.4453
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	57.8947	38.3459	naja_naja	ENSNNAP00000013455	46.9512	31.0976
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	66.9173	51.1278	neolamprologus_brichardi	ENSNBRP00000025436	64.4928	49.2754
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	63.9098	45.1128	kryptolebias_marmoratus	ENSKMAP00000002615	66.9291	47.2441
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	60.1504	45.1128	phascolarctos_cinereus	ENSPCIP00000029360	63.4921	47.619
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	69.1729	53.3835	seriola_dumerili	ENSSDUP00000031367	62.585	48.2993
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	81.203	72.9323	pygocentrus_nattereri	ENSPNAP00000030534	81.8182	73.4848
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	67.6692	51.1278	poecilia_formosa	ENSPFOP00000012701	64.2857	48.5714
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	67.6692	51.8797	scophthalmus_maximus	ENSSMAP00000008784	66.1765	50.7353
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	63.1579	53.3835	cottoperca_gobio	ENSCGOP00000033214	49.7041	42.0118
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	63.9098	50.3759	labrus_bergylta	ENSLBEP00000020947	67.4603	53.1746
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	63.9098	50.3759	labrus_bergylta	ENSLBEP00000014049	67.4603	53.1746
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	40.6015	27.8195	ficedula_albicollis	ENSFALP00000001120	33.9623	23.2704
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	48.1203	34.5865	ficedula_albicollis	ENSFALP00000026801	53.3333	38.3333
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	67.6692	51.1278	amphilophus_citrinellus	ENSACIP00000002022	66.1765	50
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	67.6692	51.1278	anabas_testudineus	ENSATEP00000065671	61.2245	46.2585
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	61.6541	46.6165	podarcis_muralis	ENSPMRP00000026840	52.5641	39.7436
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	60.9023	45.1128	podarcis_muralis	ENSPMRP00000026800	64.8	48
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	75.9398	61.6541	hucho_hucho	ENSHHUP00000086054	77.0992	62.5954
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	57.8947	48.1203	gasterosteus_aculeatus	ENSGACP00000002772	83.6957	69.5652
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	65.4135	54.8872	amphiprion_ocellaris	ENSAOCP00000011798	60.4167	50.6944
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	86.4662	85.7143	sinocyclocheilus_grahami	ENSSGRP00000006068	100	99.1304
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	55.6391	36.8421	coturnix_japonica	ENSCJPP00005012391	65.4867	43.3628
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	75.9398	61.6541	oncorhynchus_tshawytscha	ENSOTSP00005049253	77.0992	62.5954
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	64.6617	54.1353	acanthochromis_polyacanthus	ENSAPOP00000001578	59.7222	50
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	59.3985	41.3534	salvator_merianae	ENSSMRP00000021759	62.2047	43.3071
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	62.406	46.6165	chelonoidis_abingdonii	ENSCABP00000020107	66.9355	50
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	67.6692	51.1278	maylandia_zebra	ENSMZEP00005020768	65.2174	49.2754
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	66.1654	48.8722	hippocampus_comes	ENSHCOP00000018735	48.3517	35.7143
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	54.8872	38.3459	anser_brachyrhynchus	ENSABRP00000002898	57.9365	40.4762
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	61.6541	42.8571	nothobranchius_furzeri	ENSNFUP00015047503	65.0794	45.2381
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	63.9098	47.3684	oryzias_javanicus	ENSOJAP00000022955	62.0438	45.9854
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	65.4135	54.1353	stegastes_partitus	ENSSPAP00000015381	61.7021	51.0638
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	67.6692	45.1128	betta_splendens	ENSBSLP00000026358	60.4027	40.2685
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	66.1654	54.8872	amphiprion_percula	ENSAPEP00000031438	61.1111	50.6944
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	68.4211	51.8797	mastacembelus_armatus	ENSMAMP00000033065	61.9048	46.9388
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	68.4211	55.6391	sander_lucioperca	ENSSLUP00000048446	62.3288	50.6849
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	71.4286	48.8722	cynoglossus_semilaevis	ENSCSEP00000030500	68.3453	46.7626
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	69.1729	54.1353	larimichthys_crocea	ENSLCRP00005005552	66.6667	52.1739
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	50.3759	35.3383	strigops_habroptila	ENSSHBP00005003978	26.9076	18.8755
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	66.9173	53.3835	myripristis_murdjan	ENSMMDP00005006023	61.8056	49.3056
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	68.4211	52.6316	seriola_lalandi_dorsalis	ENSSLDP00000025170	61.9048	47.619
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	65.4135	51.1278	denticeps_clupeoides	ENSDCDP00000009095	62.5899	48.9209
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	62.406	47.3684	terrapene_carolina_triunguis	ENSTMTP00000010935	66.4	50.4
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	62.406	46.6165	oryzias_sinensis	ENSOSIP00000038589	34.2975	25.6198
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	49.6241	34.5865	oryzias_sinensis	ENSOSIP00000008730	42.3077	29.4872
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	50.3759	33.8346	oryzias_sinensis	ENSOSIP00000022998	27.459	18.4426
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	61.6541	46.6165	gopherus_evgoodei	ENSGEVP00005017233	65.6	49.6
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	51.1278	34.5865	aquila_chrysaetos_chrysaetos	ENSACCP00020020258	57.1429	38.6555
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	64.6617	44.3609	leptobrachium_leishanense	ENSLLEP00000046213	64.6617	44.3609
ENSCCRG00000023323	cyprinus_carpio_carpio	ENSCCRP00000043684	69.1729	56.391	paramormyrops_kingsleyae	ENSPKIP00000022947	71.3178	58.1395

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression