Description

Ensembl ID ENSCCRG00000018907 Gene ID Accession -
Symbol rps3 Alias - Full Name ribosomal protein S3
Status Confidence Length 3560 bases Strand Plus strand
Position CAJNDQ010000020.1 : 26336486 - 26340045 RNA binding domain KH_2 , Ribosomal_S3_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCCRP00000035298 KH_2 PF07650 9.2e-11 1
ENSCCRP00000035298 Ribosomal_S3_C PF00189 5.5e-23 2
ENSCCRP00000171333 KH_2 PF07650 1.1e-10 1
ENSCCRP00000171333 Ribosomal_S3_C PF00189 6.7e-23 2
ENSCCRP00000035301 KH_2 PF07650 1.1e-09 1
ENSCCRP00000110119 Ribosomal_S3_C PF00189 2.4e-23 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
rps3-201 ENSCCRT00000174120 747 164aa ENSCCRP00000117365
rps3-202 ENSCCRT00000038248 560 148aa ENSCCRP00000035301
rps3-203 ENSCCRT00000038242 832 229aa ENSCCRP00000035298
rps3-204 ENSCCRT00000136247 1068 254aa ENSCCRP00000110119
rps3-205 ENSCCRT00000160809 1056 245aa ENSCCRP00000171333

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP000000340859695.6cyprinus_carpio_carpioENSCCRP0000011011994.488294.0945

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011978.346568.5039caenorhabditis_elegansC23G10.3.180.566870.4453
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011979.921373.2283drosophila_melanogasterFBpp031206682.520375.6098
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011981.496177.9528ciona_intestinalisENSCINP0000001031378.707275.2852
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011972.047266.5354petromyzon_marinusENSPMAP0000000859691.584.5
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011953.93747.2441eptatretus_burgeriENSEBUP0000000541575.690666.2983
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.551288.5827callorhinchus_miliiENSCMIP000000438439290
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011988.18985.8268latimeria_chalumnaeENSLACP0000000690888.18985.8268
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011989.370188.189clupea_harengusENSCHAP0000003298189.723388.5376
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.12691.3386danio_rerioENSDARP0000015377595.510294.6939
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011994.881994.4882carassius_auratusENSCARP0000008344585.15984.8057
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.12690.9449astyanax_mexicanusENSAMXP0000001403595.510294.2857
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.519791.3386ictalurus_punctatusENSIPUP0000000834695.918494.6939
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.551289.3701gadus_morhuaENSGMOP0000000084593.495992.2764
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.944989.7638poecilia_reticulataENSPREP0000002596894.285793.0612
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.944989.7638xiphophorus_maculatusENSXMAP0000002493294.285793.0612
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.157589.3701cyclopterus_lumpusENSCLMP0000501249793.469492.6531
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011991.732390.5512oryzias_latipesENSORLP0000000074895.10293.8775
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.913491.3386haplochromis_burtoniENSHBUP0000000118086.131484.6715
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.913491.3386astatotilapia_callipteraENSACLP0000002029985.198683.7545
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.944989.7638sparus_aurataENSSAUP0001001157594.285793.0612
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.944988.9764lates_calcariferENSLCAP0001002774892.771190.7631
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.944988.9764lates_calcariferENSLCAP0001001937192.771190.7631
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011988.976486.2205xenopus_tropicalisENSXETP0000009952388.281285.5469
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011972.834668.5039chrysemys_picta_belliiENSCPBP0000004023886.046580.9302
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011941.732338.9764chrysemys_picta_belliiENSCPBP0000003332879.699274.4361
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.944988.5827crocodylus_porosusENSCPRP0000502511295.061792.5926
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011987.007984.6457sphenodon_punctatusENSSPUP0000002238994.849892.2747
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.551288.5827gallus_gallusENSGALP0001000412594.650292.5926
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.551288.5827anas_platyrhynchos_platyrhynchosENSAPLP0000001437294.650292.5926
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011988.18985.4331serinus_canariaENSSCAP0000000020891.056988.2114
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011988.976485.8268sarcophilus_harrisiiENSSHAP0000002860488.281285.1562
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011991.338689.3701ornithorhynchus_anatinusENSOANP0000004676375.324773.7013
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.551288.5827parus_majorENSPMJP0000000130683.636481.8182
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011939.763833.8583dasypus_novemcinctusENSDNOP0000003265875.939864.6617
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011989.763885.4331macaca_fascicularisENSMFAP0000005656580.281776.4084
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011989.763885.4331macaca_nemestrinaENSMNEP0000001601880.281776.4084
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011940.551234.252vulpes_vulpesENSVVUP0000002188576.296364.4444
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011988.18986.6142ailuropoda_melanoleucaENSAMEP0000002697488.888987.3016
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.157588.5827ailuropoda_melanoleucaENSAMEP0000003400894.238792.5926
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.157588.189ailuropoda_melanoleucaENSAMEP0000003090494.238792.1811
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.157588.189ailuropoda_melanoleucaENSAMEP0000002509894.238792.1811
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011966.141762.9921mus_spicilegusENSMSIP0000000886979.245375.4717
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011988.18985.4331rattus_norvegicusENSRNOP0000002393591.428688.5714
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011988.976487.4016dicentrarchus_labraxENSDLAP0000501221591.869990.2439
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.551288.5827pelodiscus_sinensisENSPSIP0000000977094.650292.5926
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011988.582785.8268anolis_carolinensisENSACAP0000002987079.787277.305
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.157587.0079erpetoichthys_calabaricusENSECRP0000000282891.967988.755
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011987.401685.8268ursus_maritimusENSUMAP0000001468690.612288.9796
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011991.338689.7638cyprinodon_variegatusENSCVAP0000002487694.693993.0612
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011937.007935.0394microcebus_murinusENSMICP0000005028394.949589.899
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011983.070980.315takifugu_rubripesENSTRUP0000006525284.481.6
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011966.929165.748oryzias_melastigmaENSOMEP0000001887293.922792.2652
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.12690.5512neolamprologus_brichardiENSNBRP0000000800795.510293.8775
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.12690.5512kryptolebias_marmoratusENSKMAP0000001300095.510293.8775
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011983.858379.9213saimiri_boliviensis_boliviensisENSSBOP0000000987684.860680.8765
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.12690.9449seriola_dumeriliENSSDUP0000000587795.510294.2857
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011987.795385.8268ictidomys_tridecemlineatusENSSTOP0000002444691.393489.3443
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.519791.3386pygocentrus_nattereriENSPNAP0000003134695.918494.6939
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.944989.7638poecilia_formosaENSPFOP0000001387694.285793.0612
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.944989.7638poecilia_latipinnaENSPLAP0000002191394.285793.0612
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011977.952872.4409geospiza_fortisENSGFOP0000000294780.161974.4939
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011937.401633.4646jaculus_jaculusENSJJAP0000001651188.78579.4393
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011981.496177.1654ciona_savignyiENSCSAVP0000000584380.544776.2646
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011991.732390.5512scophthalmus_maximusENSSMAP0000005622194.715493.4959
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.944990.1575cottoperca_gobioENSCGOP0000001913894.285793.4694
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011991.338690.1575labrus_bergyltaENSLBEP0000002778194.693993.4694
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011993.307189.7638ficedula_albicollisENSFALP0000000830169.096266.4723
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011970.472468.5039nomascus_leucogenysENSNLEP0000004789894.210591.5789
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.12690.5512amphilophus_citrinellusENSACIP0000003040995.510293.8775
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.913491.3386anabas_testudineusENSATEP0000000499194.492.8
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011943.307141.3386bos_mutusENSBMUP0000002652195.652291.3043
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.551288.9764gasterosteus_aculeatusENSGACP0000001770793.877592.2449
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011991.732390.1575amphiprion_ocellarisENSAOCP0000000950895.10293.4694
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011991.338689.7638sinocyclocheilus_grahamiENSSGRP0000009186489.922588.3721
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011988.976485.8268coturnix_japonicaENSCJPP0000500623293.388490.0826
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.944989.3701salvator_merianaeENSSMRP0000000858595.061793.4156
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.913492.5197scleropages_formosusENSSFOP0001500351894.494
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011938.582735.8268chelonoidis_abingdoniiENSCABP0000000714578.472.8
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011982.677280.7087chelonoidis_abingdoniiENSCABP0000001957494.170491.9283
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.913491.3386maylandia_zebraENSMZEP0000503309085.198683.7545
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.157588.189hippocampus_comesENSHCOP0000000369292.712590.6883
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.551288.5827anser_brachyrhynchusENSABRP0000001744294.650292.5926
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.913491.3386oryzias_javanicusENSOJAP0000004870594.492.8
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011991.732390.1575stegastes_partitusENSSPAP0000002960495.10293.4694
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.519790.9449betta_splendensENSBSLP000000203629492.4
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011991.732390.1575amphiprion_perculaENSAPEP0000003211695.10293.4694
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.519791.3386mastacembelus_armatusENSMAMP000000394869492.8
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011991.338690.1575sander_luciopercaENSSLUP0000004261994.693993.4694
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.12690.9449cynoglossus_semilaevisENSCSEP0000002266595.510294.2857
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011988.18986.6142larimichthys_croceaENSLCRP0000500771890.688389.0688
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.551288.5827strigops_habroptilaENSSHBP0000502339094.650292.5926
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.12690.5512pundamilia_nyerereiENSPNYP0000000978495.510293.8775
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.913491.3386myripristis_murdjanENSMMDP0000501035185.818284.3636
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.12690.9449seriola_lalandi_dorsalisENSSLDP0000002312195.510294.2857
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011993.307192.126denticeps_clupeoidesENSDCDP0000005015484.042682.9787
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011987.007985.0394struthio_camelus_australisENSSCUP0000001213394.849892.7039
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.551288.5827terrapene_carolina_triunguisENSTMTP0000000254594.650292.5926
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011942.12639.3701terrapene_carolina_triunguisENSTMTP0000001525280.451175.188
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011992.12690.9449oryzias_sinensisENSOSIP0000001831085.714384.6154
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.551288.5827gopherus_evgoodeiENSGEVP0000500021794.650292.5926
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011941.732338.9764gopherus_evgoodeiENSGEVP0000501540990.598384.6154
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.551288.5827aquila_chrysaetos_chrysaetosENSACCP0002001506894.650292.5926
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011990.944988.9764paramormyrops_kingsleyaeENSPKIP0000000864488.505786.59
ENSCCRG00000018907cyprinus_carpio_carpioENSCCRP0000011011971.259859.4488saccharomyces_cerevisiaeYNL178W75.416762.9167

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression