RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSCCRG00000011310 | Gene ID |
|
Accession |
- |
Symbol |
gig2o |
Alias |
- |
Full Name |
grass carp reovirus (GCRV)-induced gene 2o |
Status |
Confidence |
Length |
2152 bases |
Strand |
Plus strand |
Position |
CAJNDQ010000008.1 : 24853870 - 24856021 |
RNA binding domain |
PARP |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSCCRP00000020557 |
PARP |
PF00644 |
1.6e-10 |
1 |
ENSCCRP00000164919 |
PARP |
PF00644 |
2.4e-10 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
gig2o-201 |
ENSCCRT00000022324 |
904 |
224aa |
ENSCCRP00000020557 |
gig2o-202 |
ENSCCRT00000120659 |
2072 |
216aa |
ENSCCRP00000164919 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000134713 | 49.7942 | 37.8601 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 54.0179 | 41.0714 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000059168 | 52.5862 | 42.2414 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 54.4643 | 43.75 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000103169 | 40.1294 | 32.6861 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 55.3571 | 45.0893 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000042650 | 45.8333 | 34.375 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 39.2857 | 29.4643 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000114581 | 54.1284 | 42.2018 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 26.3393 | 20.5357 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000112070 | 61.8705 | 49.6403 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 38.3929 | 30.8036 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000178093 | 37.8182 | 26.9091 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 46.4286 | 33.0357 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000179168 | 57.5949 | 43.6709 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 40.625 | 30.8036 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000107860 | 60.5839 | 45.9854 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 37.0536 | 28.125 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000140109 | 63.9706 | 50.7353 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 38.8393 | 30.8036 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000042638 | 40 | 32.093 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 38.3929 | 30.8036 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 38.8393 | 30.3571 | petromyzon_marinus | ENSPMAP00000011313 | 56.129 | 43.871 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 41.0714 | 31.6964 | petromyzon_marinus | ENSPMAP00000006229 | 32.6241 | 25.1773 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 44.6429 | 32.1429 | petromyzon_marinus | ENSPMAP00000008033 | 37.8788 | 27.2727 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 66.5179 | 54.4643 | lepisosteus_oculatus | ENSLOCP00000021965 | 69.3023 | 56.7442 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 51.7857 | 42.8571 | clupea_harengus | ENSCHAP00000034845 | 75.817 | 62.7451 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 80.3571 | 72.7679 | danio_rerio | ENSDARP00000108924 | 83.3333 | 75.463 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 87.9464 | 84.8214 | carassius_auratus | ENSCARP00000003500 | 90.367 | 87.156 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 70.0893 | 56.6964 | astyanax_mexicanus | ENSAMXP00000026252 | 75.4808 | 61.0577 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 70.5357 | 58.9286 | ictalurus_punctatus | ENSIPUP00000013572 | 65.8333 | 55 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 69.6429 | 54.4643 | electrophorus_electricus | ENSEEEP00000030397 | 73.9336 | 57.8199 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 66.0714 | 53.5714 | esox_lucius | ENSELUP00000037500 | 67.8899 | 55.0459 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 63.3929 | 52.6786 | oncorhynchus_kisutch | ENSOKIP00005034414 | 61.7391 | 51.3043 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 63.3929 | 52.6786 | oncorhynchus_mykiss | ENSOMYP00000034274 | 61.7391 | 51.3043 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 64.2857 | 54.0179 | salmo_trutta | ENSSTUP00000094192 | 65.1584 | 54.7511 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 65.1786 | 55.8036 | erpetoichthys_calabaricus | ENSECRP00000020145 | 68.5446 | 58.6854 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 72.3214 | 60.2679 | pygocentrus_nattereri | ENSPNAP00000006049 | 78.6408 | 65.534 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 65.625 | 54.0179 | hucho_hucho | ENSHHUP00000042118 | 68.0556 | 56.0185 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 85.7143 | 81.25 | sinocyclocheilus_grahami | ENSSGRP00000015268 | 89.3023 | 84.6512 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 58.9286 | 56.25 | sinocyclocheilus_grahami | ENSSGRP00000006461 | 92.9577 | 88.7324 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 62.9464 | 52.6786 | oncorhynchus_tshawytscha | ENSOTSP00005073019 | 61.3043 | 51.3043 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 62.9464 | 52.6786 | oncorhynchus_tshawytscha | ENSOTSP00005089096 | 61.3043 | 51.3043 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 74.1071 | 58.4821 | scleropages_formosus | ENSSFOP00015012107 | 79.8077 | 62.9808 |
ENSCCRG00000011310 | cyprinus_carpio_carpio | ENSCCRP00000020557 | 53.125 | 42.8571 | denticeps_clupeoides | ENSDCDP00000020996 | 61.3402 | 49.4845 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |