Description

Ensembl ID ENSCCRG00000001194 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 62269 bases Strand Plus strand
Position CAJNDQ010000007.1 : 37183387 - 37245655 RNA binding domain PARP
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCCRP00000173120 PARP PF00644 1.3e-23 1
ENSCCRP00000001935 PARP PF00644 1.3e-23 1
ENSCCRP00000001939 PARP PF00644 1.3e-23 1
ENSCCRP00000127640 PARP PF00644 1.3e-23 1
ENSCCRP00000156575 PARP PF00644 1.3e-23 1
ENSCCRP00000157390 PARP PF00644 1.3e-23 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCCRT00000114025 7062 1381aa ENSCCRP00000127640
- ENSCCRT00000126122 4086 1361aa ENSCCRP00000173120
- ENSCCRT00000002135 4589 1381aa ENSCCRP00000001935
- ENSCCRT00000002139 4865 1381aa ENSCCRP00000001939
- ENSCCRT00000133042 6232 1381aa ENSCCRP00000156575
- ENSCCRT00000120815 6804 1381aa ENSCCRP00000157390
- ENSCCRT00000199232 3573 1125aa ENSCCRP00000106148

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000011392727.175213.5876cyprinus_carpio_carpioENSCCRP0000012764016.50988.25489
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012887422.782311.6935cyprinus_carpio_carpioENSCCRP000001276408.182484.19986
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000008328133.137817.3021cyprinus_carpio_carpioENSCCRP000001276408.182484.27227
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000013486626.893414.9923cyprinus_carpio_carpioENSCCRP0000012764012.59967.0239
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000003139327.554215.6347cyprinus_carpio_carpioENSCCRP0000012764012.88927.31354
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000011947629.561116.605cyprinus_carpio_carpioENSCCRP0000012764040.477922.7371
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000011303330.83216.422cyprinus_carpio_carpioENSCCRP0000012764041.057221.8682
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000006583125.916912.8606cyprinus_carpio_carpioENSCCRP0000012764038.37819.0442
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012045930.70717.2153cyprinus_carpio_carpioENSCCRP0000012764041.20223.0992
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000014729529.515215.7698cyprinus_carpio_carpioENSCCRP0000012764040.115921.4337
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000016605825.481712.7649cyprinus_carpio_carpioENSCCRP0000012764038.305619.189
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000000818622.854310.5788cyprinus_carpio_carpioENSCCRP0000012764016.58227.6756
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000000819024.319412.5227cyprinus_carpio_carpioENSCCRP0000012764019.40629.99276
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000004483731.722118.8822cyprinus_carpio_carpioENSCCRP0000012764015.20649.05141
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012202226.45516.6667cyprinus_carpio_carpioENSCCRP0000012764014.48239.12382
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000004477630.893117.716cyprinus_carpio_carpioENSCCRP0000012764015.27888.76177
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000011796025.994716.313cyprinus_carpio_carpioENSCCRP0000012764014.19268.90659
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000015518743.137324.8366cyprinus_carpio_carpioENSCCRP000001276409.558295.50326
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000017413136.565121.0526cyprinus_carpio_carpioENSCCRP000001276409.558295.50326
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000005802923.333310.2778cyprinus_carpio_carpioENSCCRP000001276406.082552.67922
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000000937222.347611.7381cyprinus_carpio_carpioENSCCRP000001276407.168723.76539
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000000392522.465811.2329cyprinus_carpio_carpioENSCCRP000001276405.937732.96886
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000015547390.176384.005cyprinus_carpio_carpioENSCCRP0000012764051.846548.2983
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000010693388.062881.2565cyprinus_carpio_carpioENSCCRP0000012764060.897956.1912
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012196630.583116.3916cyprinus_carpio_carpioENSCCRP0000012764040.260721.5786
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000015552030.790317.0143cyprinus_carpio_carpioENSCCRP0000012764040.622722.4475

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP000001276408.037654.41709ciona_intestinalisENSCINP0000002630131.005617.0391
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP000001276409.775536.08255petromyzon_marinusENSPMAP0000000153623.725814.7627
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP000001276407.385954.05503petromyzon_marinusENSPMAP0000000091225.822814.1772
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP000001276406.154963.40333callorhinchus_miliiENSCMIP0000002279631.481517.4074
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764018.826911.5858latimeria_chalumnaeENSLACP0000000113743.261226.6223
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP000001276408.616945.72049latimeria_chalumnaeENSLACP0000001034160.406140.1015
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764041.346926.3577lepisosteus_oculatusENSLOCP0000000026554.020834.4371
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764082.114470.6734danio_rerioENSDARP0000013313182.352970.8787
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764077.914667.3425danio_rerioENSDARP0000014236281.825170.7224
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764065.387455.4671danio_rerioENSDARP0000014243777.64465.8641
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764088.993584.3592carassius_auratusENSCARP0000010452593.318188.4586
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764094.858890.2245carassius_auratusENSCARP0000006180994.858890.2245
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764060.246244.9674astyanax_mexicanusENSAMXP0000004679968.988451.4925
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764064.808149.4569ictalurus_punctatusENSIPUP0000001204069.433752.9868
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764011.4418.68936fundulus_heteroclitusENSFHEP0000002615869.603552.8634
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764034.612623.8957poecilia_reticulataENSPREP0000000505360.429841.7193
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764030.123120.1303poecilia_reticulataENSPREP0000000503557.53838.4509
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764044.750230.63poecilia_reticulataENSPREP0000000511455.525638.0054
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764016.220113.1064poecilia_reticulataENSPREP0000000508869.349856.0372
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764010.218.11007xiphophorus_maculatusENSXMAP0000001036261.842149.1228
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764029.254219.9855xiphophorus_maculatusENSXMAP0000004175959.150840.41
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764028.819722.6647xiphophorus_maculatusENSXMAP0000000186366.22352.0799
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764027.516318.8993oryzias_latipesENSORLP0000003750160.509641.5605
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764030.847223.0992oryzias_latipesENSORLP0000000982864.93948.628
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764061.984143.0847oreochromis_niloticusENSONIP0000004969662.07443.1472
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764028.964519.7683haplochromis_burtoniENSHBUP0000001788357.55439.2806
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764029.905922.1579astatotilapia_callipteraENSACLP0000001933968.264550.5785
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764016.220113.2513astatotilapia_callipteraENSACLP0000001928668.292755.7927
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764060.101441.0572astatotilapia_callipteraENSACLP0000001924360.014540.9978
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764010.5728.83418astatotilapia_callipteraENSACLP0000001936467.90756.7442
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764020.637215.2064astatotilapia_callipteraENSACLP0000001941760.767644.7761
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764031.354121.2889astatotilapia_callipteraENSACLP0000001940858.751739.8915
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764027.805921.7234sparus_aurataENSSAUP0001003299365.52951.1945
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764053.222337.2918sparus_aurataENSSAUP0001003293458.287140.8406
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764015.858112.3823lates_calcariferENSLCAP0001002123267.384652.6154
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764019.116614.265lates_calcariferENSLCAP0001002122469.291351.706
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764036.205620.9269xenopus_tropicalisENSXETP0000002240839.03222.5605
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764035.119519.8407xenopus_tropicalisENSXETP0000010891136.302420.509
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764023.823312.8168crocodylus_porosusENSCPRP0000501885424.625713.2485
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764061.984142.3606dicentrarchus_labraxENSDLAP0000504234562.209342.5145
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764023.823312.5272monodelphis_domesticaENSMODP0000005463324.191212.7206
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764013.25138.83418erpetoichthys_calabaricusENSECRP0000000198249.061732.7078
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764043.157124.7647erpetoichthys_calabaricusENSECRP0000000202837.769321.673
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764053.511938.0159cyprinodon_variegatusENSCVAP0000001194760.130242.7177
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764015.49612.3099cyprinodon_variegatusENSCVAP0000001194867.507953.6278
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764023.026811.441vombatus_ursinusENSVURP0001002468923.678311.7647
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764016.147713.3237oryzias_melastigmaENSOMEP0000003151570.125857.8616
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764016.36512.5272oryzias_melastigmaENSOMEP0000001487368.484852.4242
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764017.378713.7581oryzias_melastigmaENSOMEP0000001484971.005956.213
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764016.075313.034oryzias_melastigmaENSOMEP0000001483768.944155.9006
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764014.844311.2962neolamprologus_brichardiENSNBRP0000000489169.727953.0612
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764010.35488.76177neolamprologus_brichardiENSNBRP0000000509276.063864.3617
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764013.830611.3686neolamprologus_brichardiENSNBRP0000000506168.953156.6787
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764042.288228.2404kryptolebias_marmoratusENSKMAP0000000116861.151840.8377
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764016.799413.7581kryptolebias_marmoratusENSKMAP0000001727170.090657.4018
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764015.785712.9616kryptolebias_marmoratusENSKMAP0000000516071.241858.4967
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764021.868210.4272phascolarctos_cinereusENSPCIP0000003129322.809710.8761
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764028.747322.2303seriola_dumeriliENSSDUP0000001035067.863352.4786
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764055.467138.4504seriola_dumeriliENSSDUP0000001037762.838443.5603
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764022.88216.5822pygocentrus_nattereriENSPNAP0000003258562.327445.1677
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764059.1642.7227poecilia_formosaENSPFOP0000000536758.482542.2334
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764021.723415.2788poecilia_formosaENSPFOP0000002312863.965944.9893
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764013.90311.3686poecilia_latipinnaENSPLAP0000002096969.064856.4748
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764029.254219.9131poecilia_latipinnaENSPLAP0000000297158.720939.9709
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764025.054317.958scophthalmus_maximusENSSMAP0000001271560.595443.4326
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764045.619130.992cottoperca_gobioENSCGOP0000002970657.220738.8738
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764016.509813.034amphilophus_citrinellusENSACIP0000001269671.698156.6038
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764011.8039.48588amphilophus_citrinellusENSACIP0000001271779.126263.5922
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764041.129629.0369anabas_testudineusENSATEP0000000367662.212543.9211
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764015.351212.0927anabas_testudineusENSATEP0000005511372.354956.9966
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764010.71698.54453anabas_testudineusENSATEP0000005364577.486961.7801
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764033.598823.6785anabas_testudineusENSATEP0000000369059.793842.1392
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764013.10649.34106gasterosteus_aculeatusENSGACP0000002523458.012841.3462
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764015.713312.0927amphiprion_ocellarisENSAOCP0000000015569.774953.6978
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764014.989111.1513amphiprion_ocellarisENSAOCP0000001951662.162246.2462
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764041.20239.971sinocyclocheilus_grahamiENSSGRP0000002802695.150592.3077
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764013.685711.1513acanthochromis_polyacanthusENSAPOP000000247597057.037
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764024.981917.4511scleropages_formosusENSSFOP0001501986663.419144.3015
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764056.553239.3917maylandia_zebraENSMZEP0000502827062.181543.3121
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764015.351211.3686maylandia_zebraENSMZEP0000503560965.432148.4568
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764020.854515.3512nothobranchius_furzeriENSNFUP0001504747764.429547.4273
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764011.8038.83418nothobranchius_furzeriENSNFUP0001504746761.278245.8647
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764028.602519.4062oryzias_javanicusENSOJAP0000003872960.4941.0413
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764020.202815.496oryzias_javanicusENSOJAP0000000394668.215252.3227
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764058.725639.971oryzias_javanicusENSOJAP0000000384959.370440.41
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764025.778417.958stegastes_partitusENSSPAP0000000615457.512140.0646
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764051.339635.8436stegastes_partitusENSSPAP0000000616960.237942.0561
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764061.332442.8675stegastes_partitusENSSPAP0000000619261.643.0545
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764061.115142.5054betta_splendensENSBSLP0000001064362.013243.1301
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764033.019623.9681amphiprion_perculaENSAPEP0000000514861.621644.7297
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764028.602521.3613amphiprion_perculaENSAPEP0000000517467.521450.4273
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764061.62243.4468mastacembelus_armatusENSMAMP0000002203161.577443.4153
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764018.899314.5547sander_luciopercaENSSLUP0000003425772.299255.6787
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764020.999316.0753larimichthys_croceaENSLCRP0000500893963.596548.6842
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764021.071716.0753larimichthys_croceaENSLCRP0000500895966.590450.8009
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764016.075313.034pundamilia_nyerereiENSPNYP0000002830269.37556.25
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764015.278811.2238pundamilia_nyerereiENSPNYP0000002840165.123547.8395
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764018.537314.1202seriola_lalandi_dorsalisENSSLDP0000000750371.111154.1667
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764048.443232.1506denticeps_clupeoidesENSDCDP0000004625359.625739.5722
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764061.2642.6503denticeps_clupeoidesENSDCDP0000000115062.251743.3407
ENSCCRG00000001194cyprinus_carpio_carpioENSCCRP0000012764013.613311.0065oryzias_sinensisENSOSIP0000001653260.063948.5623

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression