RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCCNG00000028279	Gene ID	109701624	Accession	-
Symbol		Alias	-	Full Name	splicing factor 3b subunit 5
Status	Confidence	Length	261 bases	Strand	Minus strand
Position	MTKA01004019.1 : 69878 - 70138	RNA binding domain	SF3b10
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCCNP00000029512	SF3b10	PF07189	4.9e-40	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCCNT00000037198	261	86aa	ENSCCNP00000029512

Gene Model

Click here to download ENSCCNG00000028279's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCCNG00000028279's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCCNG00000028279

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCCNG00000028279

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression