RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCCNG00000027424	Gene ID	109682352	Accession	-
Symbol		Alias	-	Full Name	cleavage and polyadenylation specific factor 2
Status	Confidence	Length	26239 bases	Strand	Minus strand
Position	MTKA01000656.1 : 164569 - 190807	RNA binding domain	Lactamase_B , Beta-Casp , RMMBL
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCCNP00000028474	Lactamase_B	PF00753	4.3e-06	1
ENSCCNP00000028474	Beta-Casp	PF10996	9.6e-20	2
ENSCCNP00000028474	RMMBL	PF07521	2.9e-17	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCCNT00000035963	2511	713aa	ENSCCNP00000028474

Gene Model

Click here to download ENSCCNG00000027424's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCCNG00000027424's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCCNG00000027424

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCCNG00000027424

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression