Description

Ensembl ID ENSCCNG00000019732 Gene ID 109682233 Accession -
Symbol Alias - Full Name procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
Status Confidence Length 14037 bases Strand Plus strand
Position MTKA01000641.1 : 243 - 14279 RNA binding domain 2OG-FeII_Oxy
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCCNP00000021579 2OG-FeII_Oxy PF03171 6.5e-07 1
ENSCCNP00000021530 2OG-FeII_Oxy PF03171 1e-06 1
ENSCCNP00000021327 2OG-FeII_Oxy PF03171 1.2e-06 1
ENSCCNP00000021513 2OG-FeII_Oxy PF03171 1.2e-06 1
ENSCCNP00000021344 2OG-FeII_Oxy PF03171 1.3e-06 1
ENSCCNP00000021522 2OG-FeII_Oxy PF03171 1.5e-06 1
ENSCCNP00000021526 2OG-FeII_Oxy PF03171 1.6e-06 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCCNT00000027450 1542 513aa ENSCCNP00000021327
- ENSCCNT00000027468 1596 531aa ENSCCNP00000021344
- ENSCCNT00000027662 3081 546aa ENSCCNP00000021513
- ENSCCNT00000027671 1842 613aa ENSCCNP00000021522
- ENSCCNT00000027675 1782 593aa ENSCCNP00000021526
- ENSCCNT00000027679 1491 496aa ENSCCNP00000021530
- ENSCCNT00000027737 1128 375aa ENSCCNP00000021579

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCNG00000019732

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCNG00000019732

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression