Description

Ensembl ID ENSCCEG00000006620 Gene ID 111937746 Accession -
Symbol Alias - Full Name pre-mRNA processing factor 8
Status Confidence Length 18322 bases Strand Minus strand
Position PDCF01000043.1 : 5251332 - 5269653 RNA binding domain PROCT , PRP8_domainIV , PRO8NT , U6-snRNA_bdg , PROCN , RRM_4 , U5_2-snRNA_bdg
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCCEP00000006130 PROCT PF08084 1.7e-52 1
ENSCCEP00000006130 PRP8_domainIV PF12134 2.7e-129 2
ENSCCEP00000006130 PRO8NT PF08082 6e-86 3
ENSCCEP00000006130 U6-snRNA_bdg PF10596 3e-89 4
ENSCCEP00000006130 PROCN PF08083 1.9e-235 5
ENSCCEP00000006130 RRM_4 PF10598 6.1e-48 6
ENSCCEP00000006130 U5_2-snRNA_bdg PF10597 5.8e-73 7
ENSCCEP00000006133 PROCT PF08084 1.7e-52 1
ENSCCEP00000006133 PRP8_domainIV PF12134 2.7e-129 2
ENSCCEP00000006133 PRO8NT PF08082 6e-86 3
ENSCCEP00000006133 U6-snRNA_bdg PF10596 3e-89 4
ENSCCEP00000006133 PROCN PF08083 1.9e-235 5
ENSCCEP00000006133 RRM_4 PF10598 6.1e-48 6
ENSCCEP00000006133 U5_2-snRNA_bdg PF10597 5.8e-73 7

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCCET00000009982 7431 2335aa ENSCCEP00000006130
- ENSCCET00000009986 7363 2335aa ENSCCEP00000006133

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCEG00000006620

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCCEG00000006620

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression