RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSCCAG00000031724	Gene ID		Accession	-
Symbol	MRPL55	Alias	-	Full Name	NA
Status	Confidence	Length	3233 bases	Strand	Minus strand
Position	KV389501.1 : 523221 - 526453	RNA binding domain	Mitoc_L55
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCCAP00000027758	Mitoc_L55	PF09776	1.4e-56	1
ENSCCAP00000027779	Mitoc_L55	PF09776	2.8e-56	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
MRPL55-201	ENSCCAT00000045353	755	128aa	ENSCCAP00000027758
MRPL55-202	ENSCCAT00000045374	483	160aa	ENSCCAP00000027779

Gene Model

Click here to download ENSCCAG00000031724's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCCAG00000031724's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCCAG00000031724

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	56.875	44.375	sarcophilus_harrisii	ENSSHAP00000036559	72.2222	56.3492
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	61.25	53.125	dasypus_novemcinctus	ENSDNOP00000015943	78.4	68
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	92.5	90.625	callithrix_jacchus	ENSCJAP00000030786	93.0818	91.195
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	80	76.25	cercocebus_atys	ENSCATP00000000312	84.7682	80.7947
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	87.5	82.5	macaca_fascicularis	ENSMFAP00000050716	85.8896	80.9816
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	74.375	69.375	macaca_nemestrina	ENSMNEP00000025884	84.3972	78.7234
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	87.5	82.5	papio_anubis	ENSPANP00000011184	85.8896	80.9816
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	83.125	79.375	mandrillus_leucophaeus	ENSMLEP00000038722	84.7134	80.8917
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	85.625	82.5	gorilla_gorilla	ENSGGOP00000015325	83.5366	80.4878
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	86.25	83.125	pan_paniscus	ENSPPAP00000014781	84.1463	81.0976
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	85.625	82.5	pan_troglodytes	ENSPTRP00000003495	83.5366	80.4878
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	86.25	80.625	pongo_abelii	ENSPPYP00000000144	84.6626	79.1411
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	71.875	69.375	homo_sapiens	ENSP00000337342	89.8438	86.7188
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	63.125	53.75	canis_lupus_familiaris	ENSCAFP00845010696	81.4516	69.3548
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	40	30	ursus_americanus	ENSUAMP00000029653	41.5584	31.1688
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	60.625	51.875	ursus_americanus	ENSUAMP00000020918	76.9841	65.873
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	41.25	32.5	ailuropoda_melanoleuca	ENSAMEP00000030599	54.0984	42.623
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	61.25	52.5	ailuropoda_melanoleuca	ENSAMEP00000017201	77.7778	66.6667
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	63.125	54.375	mustela_putorius_furo	ENSMPUP00000000997	80.1587	69.0476
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	60.625	55.625	felis_catus	ENSFCAP00000014099	76.9841	70.6349
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	60.625	56.25	panthera_pardus	ENSPPRP00000010406	76.9841	71.4286
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	60.625	56.25	panthera_leo	ENSPLOP00000000021	71.8519	66.6667
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	58.75	48.125	delphinapterus_leucas	ENSDLEP00000016524	74.0157	60.6299
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	45.625	35	balaenoptera_musculus	ENSBMSP00010011970	33.9535	26.0465
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	60	51.25	physeter_catodon	ENSPCTP00005002431	48.4848	41.4141
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	56.875	48.125	loxodonta_africana	ENSLAFP00000002508	72.2222	61.1111
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	59.375	51.25	procavia_capensis	ENSPCAP00000009854	59.375	51.25
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	61.875	56.875	equus_asinus	ENSEASP00005055981	79.2	72.8
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	60.625	51.875	sus_scrofa	ENSSSCP00000020702	76.9841	65.873
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	61.25	53.75	camelus_dromedarius	ENSCDRP00005009902	77.1654	67.7165
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	60	50	capra_hircus	ENSCHIP00000028761	76.1905	63.4921
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	66.25	56.25	ochotona_princeps	ENSOPRP00000013777	71.6216	60.8108
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	59.375	50.625	ovis_aries_rambouillet	ENSOARP00020023560	76.6129	65.3226
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	60.625	50.625	bos_taurus	ENSBTAP00000027614	69.2857	57.8571
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	63.75	55	oryctolagus_cuniculus	ENSOCUP00000013212	81.6	70.4
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	66.875	61.25	marmota_marmota_marmota	ENSMMMP00000019761	84.252	77.1654
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	64.375	56.875	cricetulus_griseus_chok1gshd	ENSCGRP00001021754	81.1024	71.6535
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	68.125	60	urocitellus_parryii	ENSUPAP00010011841	85.8268	75.5906
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	63.125	56.25	mesocricetus_auratus	ENSMAUP00000000396	79.5276	70.8661
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	64.375	55.625	mus_caroli	MGP_CAROLIEiJ_P0026906	76.8657	66.4179
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	63.75	56.25	mus_musculus	ENSMUSP00000104414	76.1194	67.1642
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	64.375	55.625	mus_pahari	MGP_PahariEiJ_P0033670	76.8657	66.4179
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	64.375	56.875	mus_spretus	MGP_SPRETEiJ_P0028277	76.8657	67.9104
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	63.125	55	mus_spicilegus	ENSMSIP00000025051	75.3731	65.6716
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	65	59.375	cavia_porcellus	ENSCPOP00000012831	81.25	74.2188
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	47.5	38.75	rattus_norvegicus	ENSRNOP00000076396	55.0725	44.9275
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	60	55	octodon_degus	ENSODEP00000001352	80.6723	73.9496
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	64.375	56.25	heterocephalus_glaber_female	ENSHGLP00000049333	81.1024	70.8661
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	56.875	42.5	monodelphis_domestica	ENSMODP00000017244	74.5902	55.7377
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	60.625	51.25	ursus_maritimus	ENSUMAP00000000874	76.9841	65.0794
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	55	41.25	vombatus_ursinus	ENSVURP00010004667	69.8413	52.381
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	55	41.25	vombatus_ursinus	ENSVURP00010002516	69.8413	52.381
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	57.5	43.125	vombatus_ursinus	ENSVURP00010014342	73.0159	54.7619
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	59.375	50	bos_grunniens	ENSBGRP00000005063	76.6129	64.5161
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	69.375	65	microcebus_murinus	ENSMICP00000034050	86.7188	81.25
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	60.625	50.625	bos_indicus_hybrid	ENSBIXP00005005409	69.2857	57.8571
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	63.75	58.75	otolemur_garnettii	ENSOGAP00000009829	80.315	74.0157
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	86.875	83.75	aotus_nancymaae	ENSANAP00000038285	88.535	85.3503
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	68.125	61.25	chinchilla_lanigera	ENSCLAP00000001206	85.1562	76.5625
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	88.125	83.125	saimiri_boliviensis_boliviensis	ENSSBOP00000038656	93.3775	88.0795
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	59.375	50	monodon_monoceros	ENSMMNP00015004729	75.3968	63.4921
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	59.375	50.625	phocoena_sinus	ENSPSNP00000010316	75.3968	64.2857
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	60	51.25	catagonus_wagneri	ENSCWAP00000027271	76.1905	65.0794
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	59.375	50	bison_bison_bison	ENSBBBP00000008198	76.6129	64.5161
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	66.875	60.625	jaculus_jaculus	ENSJJAP00000020524	84.252	76.378
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	58.125	50	myotis_lucifugus	ENSMLUP00000019576	73.2283	62.9921
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	66.25	59.375	sciurus_vulgaris	ENSSVLP00005005313	83.4646	74.8031
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	83.125	79.375	rhinopithecus_bieti	ENSRBIP00000028592	84.7134	80.8917
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	62.5	55	rhinolophus_ferrumequinum	ENSRFEP00010030858	80.6452	70.9677
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	83.125	79.375	rhinopithecus_roxellana	ENSRROP00000019707	84.7134	80.8917
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	59.375	50	bos_mutus	ENSBMUP00000017653	76.6129	64.5161
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	66.25	56.875	microtus_ochrogaster	ENSMOCP00000026602	79.1045	67.9104
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	60	51.875	cervus_hanglu_yarkandensis	ENSCHYP00000015494	76.8	66.4
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	71.875	67.5	chlorocebus_sabaeus	ENSCSAP00000012534	89.8438	84.375
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	86.25	81.875	nomascus_leucogenys	ENSNLEP00000017281	84.1463	79.8781
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	63.125	53.75	canis_lupus_dingo	ENSCAFP00020007074	81.4516	69.3548
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	59.375	50.625	moschus_moschiferus	ENSMMSP00000030130	75.3968	64.2857
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	68.125	58.75	peromyscus_maniculatus_bairdii	ENSPEMP00000008903	81.3433	70.1493
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	60.625	56.25	panthera_tigris_altaica	ENSPTIP00000007016	71.8519	66.6667
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	63.125	55	neovison_vison	ENSNVIP00000001116	80.1587	69.8413
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	68.75	63.125	propithecus_coquereli	ENSPCOP00000005695	85.9375	78.9062
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	66.25	58.75	carlito_syrichta	ENSTSYP00000002682	82.8125	73.4375
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	71.25	66.875	prolemur_simus	ENSPSMP00000018739	89.0625	83.5938
ENSCCAG00000031724	cebus_imitator	ENSCCAP00000027779	65	55.625	nannospalax_galili	ENSNGAP00000026158	81.25	69.5312

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression