RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSCATG00000033213	Gene ID		Accession	-
Symbol	KHDC1	Alias	-	Full Name	KH domain containing 1
Status	Confidence	Length	21475 bases	Strand	Minus strand
Position	KQ009853.1 : 7269409 - 7290883	RNA binding domain	MOEP19
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCATP00000018795	MOEP19	PF16005	1e-27	1
ENSCATP00000018799	MOEP19	PF16005	1e-27	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
KHDC1-201	ENSCATT00000042975	1233	164aa	ENSCATP00000018795
KHDC1-202	ENSCATT00000042980	1211	164aa	ENSCATP00000018799

Gene Model

Click here to download ENSCATG00000033213's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCATG00000033213's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCATG00000033213	cercocebus_atys	ENSCATP00000012988	88.2812	83.5938	cercocebus_atys	ENSCATP00000018795	68.9024	65.2439
ENSCATG00000033213	cercocebus_atys	ENSCATP00000001846	93.2099	92.5926	cercocebus_atys	ENSCATP00000018795	92.0732	91.4634
ENSCATG00000033213	cercocebus_atys	ENSCATP00000016413	46.5517	24.1379	cercocebus_atys	ENSCATP00000018795	32.9268	17.0732

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	49.3902	40.2439	dasypus_novemcinctus	ENSDNOP00000033420	55.102	44.898
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	94.5122	92.0732	callithrix_jacchus	ENSCJAP00000049108	94.5122	92.0732
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	100	100	mandrillus_leucophaeus	ENSMLEP00000025167	100	100
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	99.3902	99.3902	macaca_nemestrina	ENSMNEP00000023022	69.0678	69.0678
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	99.3902	98.1707	homo_sapiens	ENSP00000257765	99.3902	98.1707
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	97.561	96.3415	pongo_abelii	ENSPPYP00000025919	97.561	96.3415
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	99.3902	98.7805	pan_paniscus	ENSPPAP00000041853	69.0678	68.6441
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	99.3902	99.3902	macaca_mulatta	ENSMMUP00000071358	99.3902	99.3902
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	54.878	48.7805	marmota_marmota_marmota	ENSMMMP00000003179	71.4286	63.4921
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	51.8293	41.4634	urocitellus_parryii	ENSUPAP00010008529	66.4062	53.125
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	47.561	39.0244	camelus_dromedarius	ENSCDRP00005002259	64.4628	52.8926
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	99.3902	99.3902	macaca_fascicularis	ENSMFAP00000060594	47.5219	47.5219
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	57.3171	42.0732	loxodonta_africana	ENSLAFP00000017601	66.1972	48.5915
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	50.6098	37.8049	mus_spicilegus	ENSMSIP00000023650	65.873	49.2063
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	99.3902	98.1707	pan_troglodytes	ENSPTRP00000031345	69.0678	68.2203
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	99.3902	98.1707	pan_troglodytes	ENSPTRP00000064712	99.3902	98.1707
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	99.3902	98.1707	gorilla_gorilla	ENSGGOP00000037220	68.7764	67.9325
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	57.3171	39.0244	mus_musculus	ENSMUSP00000068792	56.6265	38.5542
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	50	37.8049	mus_musculus	ENSMUSP00000120275	65.0794	49.2063
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	56.7073	38.4146	mus_musculus	ENSMUSP00000085749	56.0241	37.9518
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	100	100	rhinopithecus_bieti	ENSRBIP00000039036	69.4915	69.4915
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	95.7317	91.4634	saimiri_boliviensis_boliviensis	ENSSBOP00000032259	95.7317	91.4634
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	88.4146	82.3171	saimiri_boliviensis_boliviensis	ENSSBOP00000026659	91.195	84.9057
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	98.7805	97.561	nomascus_leucogenys	ENSNLEP00000031072	64.2857	63.4921
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	43.2927	38.4146	ictidomys_tridecemlineatus	ENSSTOP00000027482	75.5319	67.0213
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	100	100	papio_anubis	ENSPANP00000056810	46.5909	46.5909
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	55.4878	37.1951	mus_caroli	MGP_CAROLIEiJ_P0016885	54.8193	36.747
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	55.4878	37.1951	mus_caroli	MGP_CAROLIEiJ_P0016886	54.8193	36.747
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	55.4878	46.9512	oryctolagus_cuniculus	ENSOCUP00000040571	48.6631	41.1765
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	51.8293	41.4634	oryctolagus_cuniculus	ENSOCUP00000016930	54.8387	43.871
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	48.7805	39.0244	oryctolagus_cuniculus	ENSOCUP00000001610	66.1157	52.8926
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	56.7073	48.7805	oryctolagus_cuniculus	ENSOCUP00000016611	73.2283	62.9921
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	51.2195	42.0732	oryctolagus_cuniculus	ENSOCUP00000037600	48.5549	39.8844
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	51.8293	43.2927	canis_lupus_familiaris	ENSCAFP00845016527	70.2479	58.6777
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	99.3902	98.7805	chlorocebus_sabaeus	ENSCSAP00000010060	99.3902	98.7805
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	99.3902	99.3902	rhinopithecus_roxellana	ENSRROP00000023580	69.0678	69.0678
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	95.7317	92.6829	cebus_imitator	ENSCCAP00000017464	95.7317	92.6829
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	89.0244	82.9268	cebus_imitator	ENSCCAP00000023321	91.25	85
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	61.5854	52.439	sciurus_vulgaris	ENSSVLP00005028561	79.5276	67.7165
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	72.561	63.4146	sciurus_vulgaris	ENSSVLP00005011203	76.2821	66.6667
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	92.6829	88.4146	aotus_nancymaae	ENSANAP00000041897	92.6829	88.4146
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	89.0244	84.1463	aotus_nancymaae	ENSANAP00000034910	91.25	86.25
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	95.1219	92.0732	aotus_nancymaae	ENSANAP00000025352	95.1219	92.0732
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	81.7073	72.561	microcebus_murinus	ENSMICP00000041548	45.4237	40.339
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	73.1707	66.4634	microcebus_murinus	ENSMICP00000047463	55.5556	50.463
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	66.4634	59.7561	microcebus_murinus	ENSMICP00000044915	85.1562	76.5625
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	56.7073	43.9024	rattus_norvegicus	ENSRNOP00000065403	65.493	50.7042
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	53.6585	40.8537	rattus_norvegicus	ENSRNOP00000093155	49.4382	37.6404
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	53.6585	40.8537	rattus_norvegicus	ENSRNOP00000074633	63.3094	48.2014
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	56.0976	41.4634	rattus_norvegicus	ENSRNOP00000039784	55.7576	41.2121
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	84.1463	77.439	prolemur_simus	ENSPSMP00000005520	85.1852	78.3951
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	83.5366	78.0488	prolemur_simus	ENSPSMP00000005593	83.5366	78.0488
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	54.2683	39.0244	heterocephalus_glaber_female	ENSHGLP00000035097	57.4194	41.2903
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	51.8293	37.8049	heterocephalus_glaber_female	ENSHGLP00000039822	62.0438	45.2555
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	81.7073	76.2195	propithecus_coquereli	ENSPCOP00000022961	81.7073	76.2195
ENSCATG00000033213	cercocebus_atys	ENSCATP00000018795	50	42.0732	neovison_vison	ENSNVIP00000019492	65.0794	54.7619

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression