RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSCARG00000021830	Gene ID	113052071	Accession	-
Symbol	pelp1	Alias	-	Full Name	proline-, glutamic acid- and leucine-rich protein 1-like
Status	Confidence	Length	16879 bases	Strand	Minus strand
Position	32 : 30093593 - 30110471	RNA binding domain	RIX1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCARP00000050599	RIX1	PF08167	2.3e-25	1
ENSCARP00000050583	RIX1	PF08167	3e-22	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCART00000052822	4129	1219aa	ENSCARP00000050583
-	ENSCART00000052838	4057	1195aa	ENSCARP00000050599

Gene Model

Click here to download ENSCARG00000021830's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCARG00000021830's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCARG00000021830	carassius_auratus	ENSCARP00000035740	90.8567	85.5848	carassius_auratus	ENSCARP00000050583	90.484	85.2338

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	23.1337	10.9926	drosophila_melanogaster	FBpp0070044	40.3433	19.1702
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	63.4947	50.9434	lepisosteus_oculatus	ENSLOCP00000017366	61.5262	49.3641
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	73.9951	60.7875	clupea_harengus	ENSCHAP00000058412	72.3917	59.4703
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	88.4331	81.05	danio_rerio	ENSDARP00000100297	88.9439	81.5182
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	80.886	71.0418	electrophorus_electricus	ENSEEEP00000024174	79.5803	69.8951
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	68.1706	52.8302	fundulus_heteroclitus	ENSFHEP00000013458	65.4331	50.7087
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	80.6399	70.5496	astyanax_mexicanus	ENSAMXP00000041447	79.7243	69.7486
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	60.5414	47.4159	gadus_morhua	ENSGMOP00000051892	63.8961	50.0433
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	67.6784	52.1739	xiphophorus_maculatus	ENSXMAP00000008181	65.0118	50.1182
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	66.612	51.8458	oryzias_latipes	ENSORLP00000025999	65.0641	50.641
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	68.7449	53.0763	poecilia_reticulata	ENSPREP00000005083	65.8805	50.8648
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	68.5808	53.1583	cyprinodon_variegatus	ENSCVAP00000016314	66.9872	51.9231
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	72.6825	60.4594	esox_lucius	ENSELUP00000010032	70.8233	58.9129
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	71.8622	57.8343	oreochromis_niloticus	ENSONIP00000060864	67.3846	54.2308
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	67.5964	51.5997	oryzias_melastigma	ENSOMEP00000004926	65.5529	50.0398
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	72.8466	60.6235	salmo_salar	ENSSSAP00000148517	71.8447	59.7896
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	57.9984	45.9393	salmo_salar	ENSSSAP00000158856	66.3227	52.5328
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	71.534	59.3109	oncorhynchus_kisutch	ENSOKIP00005082533	71.5928	59.3596
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	68.5808	53.8966	takifugu_rubripes	ENSTRUP00000016710	67.3108	52.8986
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	64.4791	53.6505	pundamilia_nyererei	ENSPNYP00000022834	75.8687	63.1274
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	71.7802	59.475	salmo_trutta	ENSSTUP00000031352	71.1382	58.9431
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	70.9598	57.3421	cottoperca_gobio	ENSCGOP00000025460	68.7053	55.5203
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	70.4676	57.4241	cyclopterus_lumpus	ENSCLMP00005037070	66.6408	54.3057
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	72.7646	58.0804	amphiprion_ocellaris	ENSAOCP00000008608	70.1186	55.9684
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	79.9836	67.6784	ictalurus_punctatus	ENSIPUP00000006633	79.4621	67.2372
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	71.1239	57.096	dicentrarchus_labrax	ENSDLAP00005067058	66.2844	53.211
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	92.2888	89.0894	sinocyclocheilus_grahami	ENSSGRP00000066011	92.7453	89.5301
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	68.9089	53.8966	mastacembelus_armatus	ENSMAMP00000050600	66.6667	52.1429
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	68.3347	52.5841	poecilia_latipinna	ENSPLAP00000028907	65.7978	50.6319
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	68.8269	53.8146	kryptolebias_marmoratus	ENSKMAP00000009172	66.3766	51.8987
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	65.7096	51.7637	hippocampus_comes	ENSHCOP00000018283	66.0891	52.0627
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	69.7293	56.0295	lates_calcarifer	ENSLCAP00010026663	68.5484	55.0806
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	42.3298	28.63	xenopus_tropicalis	ENSXETP00000037530	50.6876	34.2829
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	72.5185	57.3421	acanthochromis_polyacanthus	ENSAPOP00000028657	65.8718	52.0864
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	71.6981	59.3109	oncorhynchus_mykiss	ENSOMYP00000120883	71.757	59.3596
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	66.8581	53.9787	sander_lucioperca	ENSSLUP00000049034	69.4208	56.0477
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	72.6005	59.2289	seriola_dumerili	ENSSDUP00000007461	69.1947	56.4504
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	67.2682	51.6817	oryzias_javanicus	ENSOJAP00000049946	65.3907	50.2392
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	72.4364	58.7367	sparus_aurata	ENSSAUP00010049532	69.3637	56.2451
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	70.4676	56.8499	anabas_testudineus	ENSATEP00000004942	68.283	55.0874
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	72.6005	59.1468	seriola_lalandi_dorsalis	ENSSLDP00000014493	69.3574	56.5047
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	71.6981	58.0804	myripristis_murdjan	ENSMMDP00005017654	68.6567	55.6167
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	66.2018	54.0607	labrus_bergylta	ENSLBEP00000002550	69.9307	57.1057
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	71.6981	57.6702	larimichthys_crocea	ENSLCRP00005058150	69.2551	55.7052
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	66.2018	52.338	maylandia_zebra	ENSMZEP00005029889	68.0438	53.7943
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	72.4364	59.3109	denticeps_clupeoides	ENSDCDP00000007320	72.5555	59.4084
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	72.6005	57.9163	amphiprion_percula	ENSAPEP00000016015	69.74	55.6344
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	31.9114	26.8253	neolamprologus_brichardi	ENSNBRP00000003390	48.6859	40.9262
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	70.6317	57.3421	scleropages_formosus	ENSSFOP00015016407	68.3333	55.4762
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	93.0271	90.402	cyprinus_carpio_carpio	ENSCCRP00000143111	94.4213	91.7569
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	62.3462	48.8925	cynoglossus_semilaevis	ENSCSEP00000010732	66.9604	52.511
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	82.2806	71.9442	pygocentrus_nattereri	ENSPNAP00000012731	81.6111	71.3588
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	70.3856	55.3733	betta_splendens	ENSBSLP00000001638	67.719	53.2755
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	71.2059	57.26	stegastes_partitus	ENSSPAP00000030917	71.2059	57.26
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	43.8884	30.3527	leptobrachium_leishanense	ENSLLEP00000016194	50.9524	35.2381
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	51.0254	41.7555	poecilia_formosa	ENSPFOP00000012534	76.0391	62.2249
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	65.9557	54.2248	hucho_hucho	ENSHHUP00000087176	69.8523	57.4283
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	72.7646	60.8696	hucho_hucho	ENSHHUP00000035495	71.9967	60.2273
ENSCARG00000021830	carassius_auratus	ENSCARP00000050583	67.5144	50.9434	nothobranchius_furzeri	ENSNFUP00015010312	67.1837	50.6939

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression