| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSCARG00000017860 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
1370 bases |
Strand |
Plus strand |
| Position |
8 : 12942029 - 12943398 |
RNA binding domain |
PABP |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSCARP00000041340 |
PABP |
PF00658 |
5e-29 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSCART00000043167 |
330 |
109aa |
ENSCARP00000041340 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000129328 | 72.4409 | 68.5039 | carassius_auratus | ENSCARP00000041340 | 84.4037 | 79.8165 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000090638 | 14.4 | 13.6 | carassius_auratus | ENSCARP00000041340 | 82.5688 | 77.9817 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041391 | 14.56 | 13.92 | carassius_auratus | ENSCARP00000041340 | 83.4862 | 79.8165 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000015390 | 4.0724 | 2.71493 | carassius_auratus | ENSCARP00000041340 | 16.5138 | 11.0092 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000071531 | 4.70852 | 2.24215 | carassius_auratus | ENSCARP00000041340 | 19.2661 | 9.17431 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000107540 | 6.0241 | 3.13253 | carassius_auratus | ENSCARP00000041340 | 22.9358 | 11.9266 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000073933 | 9.19118 | 4.77941 | carassius_auratus | ENSCARP00000041340 | 22.9358 | 11.9266 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000005541 | 5.54273 | 2.77136 | carassius_auratus | ENSCARP00000041340 | 22.0183 | 11.0092 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000013339 | 3.74065 | 2.74314 | carassius_auratus | ENSCARP00000041340 | 13.7615 | 10.0917 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000103135 | 5.15021 | 2.57511 | carassius_auratus | ENSCARP00000041340 | 11.0092 | 5.50459 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000037891 | 5.15021 | 2.57511 | carassius_auratus | ENSCARP00000041340 | 11.0092 | 5.50459 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000135937 | 6.34518 | 3.5533 | carassius_auratus | ENSCARP00000041340 | 22.9358 | 12.844 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000080573 | 6 | 3.25 | carassius_auratus | ENSCARP00000041340 | 22.0183 | 11.9266 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000081776 | 5.50239 | 3.11005 | carassius_auratus | ENSCARP00000041340 | 21.1009 | 11.9266 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000067162 | 2.85714 | 0.952381 | carassius_auratus | ENSCARP00000041340 | 11.0092 | 3.66972 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000123560 | 6.40394 | 3.69458 | carassius_auratus | ENSCARP00000041340 | 23.8532 | 13.7615 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000089179 | 3.52734 | 1.5873 | carassius_auratus | ENSCARP00000041340 | 18.3486 | 8.25688 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000035733 | 3.63636 | 1.81818 | carassius_auratus | ENSCARP00000041340 | 18.3486 | 9.17431 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000018988 | 3.86847 | 1.74081 | carassius_auratus | ENSCARP00000041340 | 18.3486 | 8.25688 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000019839 | 3.66972 | 1.65138 | carassius_auratus | ENSCARP00000041340 | 18.3486 | 8.25688 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000003170 | 3.83877 | 1.53551 | carassius_auratus | ENSCARP00000041340 | 18.3486 | 7.33945 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000037118 | 1.43266 | 0.859599 | carassius_auratus | ENSCARP00000041340 | 4.58716 | 2.75229 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000111619 | 6.04839 | 3.22581 | carassius_auratus | ENSCARP00000041340 | 13.7615 | 7.33945 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000057581 | 7.5 | 3.75 | carassius_auratus | ENSCARP00000041340 | 16.5138 | 8.25688 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000097471 | 5.6338 | 4.22535 | carassius_auratus | ENSCARP00000041340 | 3.66972 | 2.75229 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000072498 | 7.86026 | 3.93013 | carassius_auratus | ENSCARP00000041340 | 16.5138 | 8.25688 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000033396 | 4.03226 | 2.68817 | carassius_auratus | ENSCARP00000041340 | 13.7615 | 9.17431 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000116902 | 4.14365 | 2.76243 | carassius_auratus | ENSCARP00000041340 | 13.7615 | 9.17431 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000044507 | 4.53258 | 2.83286 | carassius_auratus | ENSCARP00000041340 | 14.6789 | 9.17431 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041236 | 4.80226 | 2.82486 | carassius_auratus | ENSCARP00000041340 | 15.5963 | 9.17431 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000098691 | 2.5 | 1.75 | carassius_auratus | ENSCARP00000041340 | 9.17431 | 6.42202 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000097330 | 3.59712 | 2.63789 | carassius_auratus | ENSCARP00000041340 | 13.7615 | 10.0917 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000046233 | 3.64964 | 2.6764 | carassius_auratus | ENSCARP00000041340 | 13.7615 | 10.0917 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000036743 | 3.04569 | 1.77665 | carassius_auratus | ENSCARP00000041340 | 11.0092 | 6.42202 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000058379 | 2.8103 | 1.63934 | carassius_auratus | ENSCARP00000041340 | 11.0092 | 6.42202 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000112362 | 14.1966 | 12.4805 | carassius_auratus | ENSCARP00000041340 | 83.4862 | 73.3945 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000097883 | 14.4444 | 12.6984 | carassius_auratus | ENSCARP00000041340 | 83.4862 | 73.3945 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000089381 | 15.4499 | 13.5823 | carassius_auratus | ENSCARP00000041340 | 83.4862 | 73.3945 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000069684 | 1.5444 | 1.1583 | carassius_auratus | ENSCARP00000041340 | 3.66972 | 2.75229 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000129700 | 14.1524 | 12.4417 | carassius_auratus | ENSCARP00000041340 | 83.4862 | 73.3945 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000013427 | 11.7371 | 10.3286 | carassius_auratus | ENSCARP00000041340 | 68.8073 | 60.5505 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000114057 | 14.0845 | 12.5196 | carassius_auratus | ENSCARP00000041340 | 82.5688 | 73.3945 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000014807 | 14.0845 | 12.3631 | carassius_auratus | ENSCARP00000041340 | 82.5688 | 72.4771 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000079324 | 13.8846 | 12.3245 | carassius_auratus | ENSCARP00000041340 | 81.6514 | 72.4771 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000108296 | 2.95567 | 1.23153 | carassius_auratus | ENSCARP00000041340 | 11.0092 | 4.58716 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000094361 | 3.07329 | 0.945626 | carassius_auratus | ENSCARP00000041340 | 11.9266 | 3.66972 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000099814 | 2.73632 | 1.74129 | carassius_auratus | ENSCARP00000041340 | 10.0917 | 6.42202 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000129431 | 2.6764 | 1.70316 | carassius_auratus | ENSCARP00000041340 | 10.0917 | 6.42202 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000022048 | 2.73632 | 1.49254 | carassius_auratus | ENSCARP00000041340 | 10.0917 | 5.50459 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000001362 | 6.23441 | 3.2419 | carassius_auratus | ENSCARP00000041340 | 22.9358 | 11.9266 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000070204 | 6.04534 | 3.02267 | carassius_auratus | ENSCARP00000041340 | 22.0183 | 11.0092 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000116313 | 5.17241 | 2.95567 | carassius_auratus | ENSCARP00000041340 | 19.2661 | 11.0092 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000060354 | 5.37084 | 3.32481 | carassius_auratus | ENSCARP00000041340 | 19.2661 | 11.9266 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000012903 | 10.5691 | 4.06504 | carassius_auratus | ENSCARP00000041340 | 11.9266 | 4.58716 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000017321 | 0.571429 | 0.571429 | carassius_auratus | ENSCARP00000041340 | 0.917431 | 0.917431 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000097704 | 4.09836 | 3.00546 | carassius_auratus | ENSCARP00000041340 | 13.7615 | 10.0917 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000066321 | 3.93701 | 2.88714 | carassius_auratus | ENSCARP00000041340 | 13.7615 | 10.0917 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000064264 | 2.3845 | 1.34128 | carassius_auratus | ENSCARP00000041340 | 14.6789 | 8.25688 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000111411 | 1.04099 | 0.585556 | carassius_auratus | ENSCARP00000041340 | 14.6789 | 8.25688 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000006729 | 0.168919 | 0.168919 | carassius_auratus | ENSCARP00000041340 | 0.917431 | 0.917431 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000046920 | 0.176056 | 0.176056 | carassius_auratus | ENSCARP00000041340 | 0.917431 | 0.917431 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000134885 | 2.99685 | 1.73502 | carassius_auratus | ENSCARP00000041340 | 17.4312 | 10.0917 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000026527 | 3.02548 | 1.75159 | carassius_auratus | ENSCARP00000041340 | 17.4312 | 10.0917 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000004300 | 5.83153 | 2.80778 | carassius_auratus | ENSCARP00000041340 | 24.7706 | 11.9266 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000034236 | 5.5794 | 2.36052 | carassius_auratus | ENSCARP00000041340 | 23.8532 | 10.0917 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000002220 | 2.30906 | 1.42096 | carassius_auratus | ENSCARP00000041340 | 11.9266 | 7.33945 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000089140 | 2.36794 | 1.45719 | carassius_auratus | ENSCARP00000041340 | 11.9266 | 7.33945 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000063566 | 2.74223 | 1.46252 | carassius_auratus | ENSCARP00000041340 | 13.7615 | 7.33945 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000100787 | 2.55009 | 1.45719 | carassius_auratus | ENSCARP00000041340 | 12.844 | 7.33945 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000054828 | 2.20884 | 1.20482 | carassius_auratus | ENSCARP00000041340 | 10.0917 | 5.50459 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000133779 | 2.04842 | 1.11732 | carassius_auratus | ENSCARP00000041340 | 10.0917 | 5.50459 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041340 | 72.4771 | 62.3853 | ciona_intestinalis | ENSCINP00000005723 | 15.7685 | 13.5729 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041340 | 1.83486 | 1.83486 | electrophorus_electricus | ENSEEEP00000007747 | 1.36054 | 1.36054 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041340 | 0 | 0 | electrophorus_electricus | ENSEEEP00000007749 | 0 | 0 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041340 | 3.66972 | 2.75229 | electrophorus_electricus | ENSEEEP00000037163 | 3.38983 | 2.54237 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041340 | 77.0642 | 66.055 | felis_catus | ENSFCAP00000010853 | 31.8182 | 27.2727 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041340 | 12.844 | 10.0917 | chrysemys_picta_bellii | ENSCPBP00000010143 | 8.58896 | 6.74847 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041340 | 67.8899 | 58.7156 | chrysemys_picta_bellii | ENSCPBP00000024981 | 52.8571 | 45.7143 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041340 | 81.6514 | 64.2202 | geospiza_fortis | ENSGFOP00000003021 | 57.0513 | 44.8718 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041340 | 72.4771 | 62.3853 | ciona_savignyi | ENSCSAVP00000005202 | 11.9335 | 10.2719 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041340 | 73.3945 | 63.3028 | ciona_savignyi | ENSCSAVP00000007103 | 12.5984 | 10.8661 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041340 | 0 | 0 | octodon_degus | ENSODEP00000003811 | 0 | 0 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041340 | 78.8991 | 76.1468 | sinocyclocheilus_grahami | ENSSGRP00000008426 | 84.3137 | 81.3726 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041340 | 0.917431 | 0.917431 | oncorhynchus_tshawytscha | ENSOTSP00005051723 | 0.689655 | 0.689655 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041340 | 0 | 0 | bos_mutus | ENSBMUP00000018452 | 0 | 0 |
| ENSCARG00000017860 | carassius_auratus | ENSCARP00000041340 | 0 | 0 | paramormyrops_kingsleyae | ENSPKIP00000039470 | 0 | 0 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
