RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSCARG00000015576	Gene ID	113105801	Accession	-
Symbol	pelp1	Alias	-	Full Name	proline-, glutamic acid- and leucine-rich protein 1-like
Status	Confidence	Length	10953 bases	Strand	Minus strand
Position	7 : 9251746 - 9262698	RNA binding domain	RIX1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCARP00000035740	RIX1	PF08167	1.1e-25	1
ENSCARP00000035752	RIX1	PF08167	3e-21	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCART00000037358	3645	1214aa	ENSCARP00000035740
-	ENSCART00000037370	3606	1201aa	ENSCARP00000035752

Gene Model

Click here to download ENSCARG00000015576's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCARG00000015576's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCARG00000015576	carassius_auratus	ENSCARP00000050583	90.484	85.2338	carassius_auratus	ENSCARP00000035740	90.8567	85.5848

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	23.0643	10.7908	drosophila_melanogaster	FBpp0070044	40.0572	18.7411
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	65.3213	52.9654	lepisosteus_oculatus	ENSLOCP00000017366	63.0366	51.1129
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	75.0412	61.944	clupea_harengus	ENSCHAP00000058412	73.114	60.3531
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	90.1977	83.7727	danio_rerio	ENSDARP00000100297	90.3465	83.9109
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	82.8666	72.57	electrophorus_electricus	ENSEEEP00000024174	81.1945	71.1057
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	70.0165	54.86	fundulus_heteroclitus	ENSFHEP00000013458	66.9291	52.4409
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	81.631	71.5816	astyanax_mexicanus	ENSAMXP00000041447	80.3731	70.4785
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	61.1203	48.5997	gadus_morhua	ENSGMOP00000051892	64.2424	51.0823
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	68.6161	53.7891	xiphophorus_maculatus	ENSXMAP00000008181	65.6422	51.4578
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	68.7809	53.0478	oryzias_latipes	ENSORLP00000025999	66.9071	51.6026
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	69.7694	54.6129	poecilia_reticulata	ENSPREP00000005083	66.5881	52.1226
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	69.3575	55.1895	cyprinodon_variegatus	ENSCVAP00000016314	67.4679	53.6859
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	73.3114	61.285	esox_lucius	ENSELUP00000010032	71.1431	59.4724
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	72.9819	58.2372	oreochromis_niloticus	ENSONIP00000060864	68.1538	54.3846
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	69.4399	52.8007	oryzias_melastigma	ENSOMEP00000004926	67.0644	50.9944
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	73.6409	61.944	salmo_salar	ENSSSAP00000148517	72.3301	60.8414
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	58.2372	46.8699	salmo_salar	ENSSSAP00000158856	66.3227	53.3771
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	72.0758	60.3789	oncorhynchus_kisutch	ENSOKIP00005082533	71.8391	60.1806
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	70.0988	53.8715	takifugu_rubripes	ENSTRUP00000016710	68.5185	52.657
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	65.5684	54.5305	pundamilia_nyererei	ENSPNYP00000022834	76.834	63.8996
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	72.4053	60.7084	salmo_trutta	ENSSTUP00000031352	71.4634	59.9187
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	72.6524	58.3196	cottoperca_gobio	ENSCGOP00000025460	70.0556	56.2351
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	71.6639	59.3904	cyclopterus_lumpus	ENSCLMP00005037070	67.4942	55.9348
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	73.9703	59.4728	amphiprion_ocellaris	ENSAOCP00000008608	70.9881	57.0751
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	81.3839	70.346	ictalurus_punctatus	ENSIPUP00000006633	80.5216	69.6007
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	72.8995	58.0725	dicentrarchus_labrax	ENSDLAP00005067058	67.6606	53.8991
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	95.2224	92.5865	sinocyclocheilus_grahami	ENSSGRP00000075857	94.8318	92.2067
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	70.0988	55.2718	mastacembelus_armatus	ENSMAMP00000050600	67.5397	53.254
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	69.3575	54.201	poecilia_latipinna	ENSPLAP00000028907	66.5087	51.9747
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	69.6046	54.5305	kryptolebias_marmoratus	ENSKMAP00000009172	66.8513	52.3734
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	67.2158	53.3773	hippocampus_comes	ENSHCOP00000018283	67.3267	53.4653
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	70.4283	57.1664	lates_calcarifer	ENSLCAP00010026663	68.9516	55.9677
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	42.8336	29.4069	xenopus_tropicalis	ENSXETP00000037530	51.0806	35.0688
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	73.6409	58.9786	acanthochromis_polyacanthus	ENSAPOP00000028657	66.617	53.3532
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	72.4876	60.7908	oncorhynchus_mykiss	ENSOMYP00000120883	72.2496	60.5911
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	68.4514	55.2718	sander_lucioperca	ENSSLUP00000049034	70.7836	57.155
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	73.229	60.2142	seriola_dumerili	ENSSDUP00000007461	69.5074	57.154
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	69.4399	52.8007	oryzias_javanicus	ENSOJAP00000049946	67.2249	51.1164
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	73.9703	59.4728	sparus_aurata	ENSSAUP00010049532	70.542	56.7164
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	71.8287	57.4135	anabas_testudineus	ENSATEP00000004942	69.3164	55.4054
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	73.3114	60.2142	seriola_lalandi_dorsalis	ENSSLDP00000014493	69.7492	57.2884
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	72.6524	59.4728	myripristis_murdjan	ENSMMDP00005017654	69.2852	56.7164
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	67.9572	55.2718	labrus_bergylta	ENSLBEP00000002550	71.4905	58.1456
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	73.3114	58.4843	larimichthys_crocea	ENSLCRP00005058150	70.523	56.2599
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	67.4629	53.1301	maylandia_zebra	ENSMZEP00005029889	69.0556	54.3845
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	74.547	61.3674	denticeps_clupeoides	ENSDCDP00000007320	74.3632	61.2161
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	73.8056	59.3081	amphiprion_percula	ENSAPEP00000016015	70.6068	56.7376
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	32.5371	27.0181	neolamprologus_brichardi	ENSNBRP00000003390	49.4368	41.0513
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	71.911	58.3196	scleropages_formosus	ENSSFOP00015016407	69.2857	56.1905
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	91.8451	88.6326	cyprinus_carpio_carpio	ENSCCRP00000109088	95.5441	92.2022
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	62.9325	50.1647	cynoglossus_semilaevis	ENSCSEP00000010732	67.3128	53.6564
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	83.6903	73.8056	pygocentrus_nattereri	ENSPNAP00000012731	82.6688	72.9048
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	71.7463	56.0956	betta_splendens	ENSBSLP00000001638	68.7451	53.749
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	72.8995	59.2257	stegastes_partitus	ENSSPAP00000030917	72.6005	58.9828
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	45.14	30.7249	leptobrachium_leishanense	ENSLLEP00000016194	52.1905	35.5238
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	52.0593	43.1631	poecilia_formosa	ENSPFOP00000012534	77.2616	64.0587
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	67.4629	55.3542	hucho_hucho	ENSHHUP00000087176	71.1555	58.384
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	73.3937	62.0264	hucho_hucho	ENSHHUP00000035495	72.3214	61.1201
ENSCARG00000015576	carassius_auratus	ENSCARP00000035740	68.5338	52.2241	nothobranchius_furzeri	ENSNFUP00015010312	67.9184	51.7551

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression