Description

Ensembl ID ENSCARG00000012192 Gene ID 113108562 Accession -
Symbol sap18 Alias - Full Name histone deacetylase complex subunit SAP18
Status Confidence Length 1866 bases Strand Minus strand
Position 9 : 23526549 - 23528414 RNA binding domain SAP18
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCARP00000027389 SAP18 PF06487 8.7e-42 1
ENSCARP00000027385 SAP18 PF06487 2e-38 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCART00000028716 1712 166aa ENSCARP00000027385
- ENSCART00000028721 1361 153aa ENSCARP00000027389

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCARG00000012192carassius_auratusENSCARP0000004285588.888986.2745carassius_auratusENSCARP0000002738581.927779.5181
ENSCARG00000012192carassius_auratusENSCARP0000007455488.888984.9673carassius_auratusENSCARP0000002738581.927778.3133

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCARG00000012192carassius_auratusENSCARP0000002738559.036140.3614caenorhabditis_elegansC16C10.4.159.036140.3614
ENSCARG00000012192carassius_auratusENSCARP0000002738562.048246.3855drosophila_melanogasterFBpp031250568.666751.3333
ENSCARG00000012192carassius_auratusENSCARP0000002738566.867551.2048ciona_intestinalisENSCINP0000003187168.518552.4691
ENSCARG00000012192carassius_auratusENSCARP0000002738568.072359.6386petromyzon_marinusENSPMAP0000000116483.088272.7941
ENSCARG00000012192carassius_auratusENSCARP0000002738566.265150.6024eptatretus_burgeriENSEBUP0000002582757.291743.75
ENSCARG00000012192carassius_auratusENSCARP0000002738577.710873.494callorhinchus_miliiENSCMIP0000002206870.879167.033
ENSCARG00000012192carassius_auratusENSCARP0000002738565.060251.8072ciona_savignyiENSCSAVP0000000526569.230855.1282

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression