RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSCARG00000012192 | Gene ID |
113108562 |
Accession |
- |
Symbol |
sap18 |
Alias |
- |
Full Name |
histone deacetylase complex subunit SAP18 |
Status |
Confidence |
Length |
1866 bases |
Strand |
Minus strand |
Position |
9 : 23526549 - 23528414 |
RNA binding domain |
SAP18 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSCARP00000027389 |
SAP18 |
PF06487 |
8.7e-42 |
1 |
ENSCARP00000027385 |
SAP18 |
PF06487 |
2e-38 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSCART00000028716 |
1712 |
166aa |
ENSCARP00000027385 |
- |
ENSCART00000028721 |
1361 |
153aa |
ENSCARP00000027389 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSCARG00000012192 | carassius_auratus | ENSCARP00000042855 | 88.8889 | 86.2745 | carassius_auratus | ENSCARP00000027385 | 81.9277 | 79.5181 |
ENSCARG00000012192 | carassius_auratus | ENSCARP00000074554 | 88.8889 | 84.9673 | carassius_auratus | ENSCARP00000027385 | 81.9277 | 78.3133 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSCARG00000012192 | carassius_auratus | ENSCARP00000027385 | 59.0361 | 40.3614 | caenorhabditis_elegans | C16C10.4.1 | 59.0361 | 40.3614 |
ENSCARG00000012192 | carassius_auratus | ENSCARP00000027385 | 62.0482 | 46.3855 | drosophila_melanogaster | FBpp0312505 | 68.6667 | 51.3333 |
ENSCARG00000012192 | carassius_auratus | ENSCARP00000027385 | 66.8675 | 51.2048 | ciona_intestinalis | ENSCINP00000031871 | 68.5185 | 52.4691 |
ENSCARG00000012192 | carassius_auratus | ENSCARP00000027385 | 68.0723 | 59.6386 | petromyzon_marinus | ENSPMAP00000001164 | 83.0882 | 72.7941 |
ENSCARG00000012192 | carassius_auratus | ENSCARP00000027385 | 66.2651 | 50.6024 | eptatretus_burgeri | ENSEBUP00000025827 | 57.2917 | 43.75 |
ENSCARG00000012192 | carassius_auratus | ENSCARP00000027385 | 77.7108 | 73.494 | callorhinchus_milii | ENSCMIP00000022068 | 70.8791 | 67.033 |
ENSCARG00000012192 | carassius_auratus | ENSCARP00000027385 | 65.0602 | 51.8072 | ciona_savignyi | ENSCSAVP00000005265 | 69.2308 | 55.1282 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |