Description

Ensembl ID ENSCAPG00000016009 Gene ID Accession -
Symbol Alias - Full Name U2 snRNP associated SURP domain containing
Status Confidence Length 37405 bases Strand Plus strand
Position AVPZ01000889.1 : 39732673 - 39770077 RNA binding domain RRM_1 , Surp , cwf21 , CID
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCAPP00000016068 RRM_1 PF00076 1.6e-14 1
ENSCAPP00000016068 Surp PF01805 6.7e-19 2
ENSCAPP00000016068 cwf21 PF08312 2.7e-10 3
ENSCAPP00000016068 CID PF04818 1.1e-08 4
ENSCAPP00000016065 RRM_1 PF00076 1.8e-14 1
ENSCAPP00000016065 Surp PF01805 7.5e-19 2
ENSCAPP00000016065 cwf21 PF08312 2.9e-10 3
ENSCAPP00000016065 CID PF04818 1.3e-08 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCAPT00000019852 2715 904aa ENSCAPP00000016065
- ENSCAPT00000019855 2562 853aa ENSCAPP00000016068

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAPG00000016009

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAPG00000016009

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression