Description

Ensembl ID ENSCANG00000038259 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 11741 bases Strand Plus strand
Position KN985201.1 : 582057 - 593797 RNA binding domain RRM_5 , RRM_8 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCANP00000031437 RRM_5 PF13893 5.2e-66 1
ENSCANP00000031437 RRM_5 PF13893 5.2e-66 2
ENSCANP00000031437 RRM_5 PF13893 5.2e-66 3
ENSCANP00000031437 RRM_5 PF13893 5.2e-66 4
ENSCANP00000031437 RRM_8 PF11835 8.8e-15 5
ENSCANP00000031437 RRM_1 PF00076 2.7e-36 6
ENSCANP00000031437 RRM_1 PF00076 2.7e-36 7
ENSCANP00000031437 RRM_1 PF00076 2.7e-36 8
ENSCANP00000031407 RRM_5 PF13893 6.7e-66 1
ENSCANP00000031407 RRM_5 PF13893 6.7e-66 2
ENSCANP00000031407 RRM_5 PF13893 6.7e-66 3
ENSCANP00000031407 RRM_5 PF13893 6.7e-66 4
ENSCANP00000031407 RRM_8 PF11835 1e-14 5
ENSCANP00000031407 RRM_1 PF00076 3.7e-36 6
ENSCANP00000031407 RRM_1 PF00076 3.7e-36 7
ENSCANP00000031407 RRM_1 PF00076 3.7e-36 8
ENSCANP00000031079 RRM_5 PF13893 9.5e-66 1
ENSCANP00000031079 RRM_5 PF13893 9.5e-66 2
ENSCANP00000031079 RRM_5 PF13893 9.5e-66 3
ENSCANP00000031079 RRM_8 PF11835 1.2e-14 4
ENSCANP00000031079 RRM_1 PF00076 1.1e-35 5
ENSCANP00000031079 RRM_1 PF00076 1.1e-35 6
ENSCANP00000031079 RRM_1 PF00076 1.1e-35 7
ENSCANP00000031435 RRM_5 PF13893 6.4e-55 1
ENSCANP00000031435 RRM_5 PF13893 6.4e-55 2
ENSCANP00000031435 RRM_5 PF13893 6.4e-55 3
ENSCANP00000031435 RRM_5 PF13893 6.4e-55 4
ENSCANP00000031435 RRM_8 PF11835 4.2e-14 5
ENSCANP00000031435 RRM_1 PF00076 1.4e-30 6
ENSCANP00000031435 RRM_1 PF00076 1.4e-30 7
ENSCANP00000031506 RRM_5 PF13893 4.4e-50 1
ENSCANP00000031506 RRM_5 PF13893 4.4e-50 2
ENSCANP00000031506 RRM_5 PF13893 4.4e-50 3
ENSCANP00000031506 RRM_5 PF13893 4.4e-50 4
ENSCANP00000031506 RRM_8 PF11835 2.6e-14 5
ENSCANP00000031506 RRM_1 PF00076 1.5e-30 6
ENSCANP00000031506 RRM_1 PF00076 1.5e-30 7
ENSCANP00000031512 RRM_5 PF13893 4.2e-45 1
ENSCANP00000031512 RRM_5 PF13893 4.2e-45 2
ENSCANP00000031512 RRM_1 PF00076 7.3e-17 3
ENSCANP00000031512 RRM_1 PF00076 7.3e-17 4
ENSCANP00000031511 RRM_5 PF13893 2.6e-11 1
ENSCANP00000031511 RRM_5 PF13893 2.6e-11 2
ENSCANP00000031511 RRM_8 PF11835 2.2e-14 3
ENSCANP00000031511 RRM_1 PF00076 1.2e-16 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCANT00000054294 1764 587aa ENSCANP00000031079
- ENSCANT00000054623 1671 556aa ENSCANP00000031407
- ENSCANT00000054651 1650 549aa ENSCANP00000031435
- ENSCANT00000054653 1593 530aa ENSCANP00000031437
- ENSCANT00000054723 1575 524aa ENSCANP00000031506
- ENSCANT00000054728 906 301aa ENSCANP00000031511
- ENSCANT00000054730 585 194aa ENSCANP00000031512

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCANG00000038259

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCANG00000038259

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression