Description

Ensembl ID ENSCANG00000034418 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 14436 bases Strand Minus strand
Position KN982848.1 : 576831 - 591266 RNA binding domain Lactamase_B , Beta-Casp , RMMBL
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCANP00000023425 Lactamase_B PF00753 6.4e-11 1
ENSCANP00000023425 Beta-Casp PF10996 1.3e-20 2
ENSCANP00000023425 RMMBL PF07521 1.7e-15 3
ENSCANP00000023295 Lactamase_B PF00753 6.5e-11 1
ENSCANP00000023295 Beta-Casp PF10996 1.8e-25 2
ENSCANP00000023295 RMMBL PF07521 1.7e-15 3
ENSCANP00000023492 Lactamase_B PF00753 6.6e-11 1
ENSCANP00000023492 Beta-Casp PF10996 1.9e-25 2
ENSCANP00000023492 RMMBL PF07521 1.7e-15 3
ENSCANP00000023315 Lactamase_B PF00753 7.7e-11 1
ENSCANP00000023315 Beta-Casp PF10996 7.9e-24 2
ENSCANP00000023315 RMMBL PF07521 2e-15 3
ENSCANP00000023495 Lactamase_B PF00753 1e-08 1
ENSCANP00000023488 Lactamase_B PF00753 2.1e-08 1
ENSCANP00000023488 Beta-Casp PF10996 1e-23 2
ENSCANP00000023488 RMMBL PF07521 0.00011 3
ENSCANP00000023302 Beta-Casp PF10996 1.7e-25 1
ENSCANP00000023302 RMMBL PF07521 1.3e-15 2
ENSCANP00000023429 Beta-Casp PF10996 1.4e-20 1
ENSCANP00000023429 RMMBL PF07521 1.4e-15 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCANT00000046282 2178 600aa ENSCANP00000023295
- ENSCANT00000046289 1856 499aa ENSCANP00000023302
- ENSCANT00000046302 1980 659aa ENSCANP00000023315
- ENSCANT00000046413 1794 597aa ENSCANP00000023425
- ENSCANT00000046417 1533 510aa ENSCANP00000023429
- ENSCANT00000046476 1182 393aa ENSCANP00000023488
- ENSCANT00000046480 1821 606aa ENSCANP00000023492
- ENSCANT00000046483 795 264aa ENSCANP00000023495
- ENSCANT00000046484 171 56aa ENSCANP00000023496

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCANG00000034418

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCANG00000034418

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression