Description

Ensembl ID ENSCANG00000033628 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 43742 bases Strand Plus strand
Position KN979940.1 : 10905080 - 10948821 RNA binding domain RRM_5 , RRM_8 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCANP00000020702 RRM_5 PF13893 7.9e-47 1
ENSCANP00000020702 RRM_5 PF13893 7.9e-47 2
ENSCANP00000020702 RRM_8 PF11835 7.8e-12 3
ENSCANP00000020702 RRM_1 PF00076 7.5e-20 4
ENSCANP00000020606 RRM_5 PF13893 8.5e-47 1
ENSCANP00000020606 RRM_5 PF13893 8.5e-47 2
ENSCANP00000020606 RRM_8 PF11835 8.3e-12 3
ENSCANP00000020606 RRM_1 PF00076 8.9e-20 4
ENSCANP00000020660 RRM_5 PF13893 1e-46 1
ENSCANP00000020660 RRM_5 PF13893 1e-46 2
ENSCANP00000020660 RRM_8 PF11835 9.1e-12 3
ENSCANP00000020660 RRM_1 PF00076 1.1e-19 4
ENSCANP00000020684 RRM_5 PF13893 2.1e-44 1
ENSCANP00000020684 RRM_1 PF00076 5.8e-15 2
ENSCANP00000020704 RRM_8 PF11835 4.2e-12 1
ENSCANP00000020704 RRM_1 PF00076 6.2e-13 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCANT00000043578 1557 518aa ENSCANP00000020606
- ENSCANT00000043632 2693 542aa ENSCANP00000020660
- ENSCANT00000043656 2591 508aa ENSCANP00000020684
- ENSCANT00000043674 1509 502aa ENSCANP00000020702
- ENSCANT00000043676 849 282aa ENSCANP00000020704

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCANG00000033628

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCANG00000033628

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression