Description

Ensembl ID ENSCANG00000002642 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 111974 bases Strand Minus strand
Position KN979419.1 : 1089762 - 1201735 RNA binding domain RRM_5 , RRM_8 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCANP00000000721 RRM_5 PF13893 4.8e-62 1
ENSCANP00000000721 RRM_5 PF13893 4.8e-62 2
ENSCANP00000000721 RRM_5 PF13893 4.8e-62 3
ENSCANP00000000721 RRM_8 PF11835 1.1e-14 4
ENSCANP00000000721 RRM_1 PF00076 2.6e-29 5
ENSCANP00000000721 RRM_1 PF00076 2.6e-29 6
ENSCANP00000000766 RRM_5 PF13893 5.4e-62 1
ENSCANP00000000766 RRM_5 PF13893 5.4e-62 2
ENSCANP00000000766 RRM_5 PF13893 5.4e-62 3
ENSCANP00000000766 RRM_8 PF11835 1.1e-14 4
ENSCANP00000000766 RRM_1 PF00076 2.9e-29 5
ENSCANP00000000766 RRM_1 PF00076 2.9e-29 6
ENSCANP00000000783 RRM_5 PF13893 3e-61 1
ENSCANP00000000783 RRM_5 PF13893 3e-61 2
ENSCANP00000000783 RRM_5 PF13893 3e-61 3
ENSCANP00000000783 RRM_8 PF11835 7.2e-15 4
ENSCANP00000000783 RRM_1 PF00076 1.4e-26 5
ENSCANP00000000783 RRM_1 PF00076 1.4e-26 6
ENSCANP00000000795 RRM_5 PF13893 3e-61 1
ENSCANP00000000795 RRM_5 PF13893 3e-61 2
ENSCANP00000000795 RRM_5 PF13893 3e-61 3
ENSCANP00000000795 RRM_8 PF11835 7.2e-15 4
ENSCANP00000000795 RRM_1 PF00076 1.4e-26 5
ENSCANP00000000795 RRM_1 PF00076 1.4e-26 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCANT00000003062 1808 558aa ENSCANP00000000721
- ENSCANT00000003193 1719 568aa ENSCANP00000000766
- ENSCANT00000003264 1458 457aa ENSCANP00000000783
- ENSCANT00000003341 1374 457aa ENSCANP00000000795

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCANG00000002642

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCANG00000002642

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression