RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSCAFG00805030623 | Gene ID |
|
Accession |
- |
Symbol |
ATXN2L |
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
12715 bases |
Strand |
Plus strand |
Position |
6 : 18508941 - 18521655 |
RNA binding domain |
LsmAD , PAM2 , SM-ATX |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSCAFP00805043886 |
LsmAD |
PF06741 |
5.8e-17 |
1 |
ENSCAFP00805043886 |
PAM2 |
PF07145 |
2.2e-05 |
2 |
ENSCAFP00805043886 |
SM-ATX |
PF14438 |
5.8e-19 |
3 |
ENSCAFP00805043827 |
LsmAD |
PF06741 |
6.2e-17 |
1 |
ENSCAFP00805043827 |
PAM2 |
PF07145 |
2.3e-05 |
2 |
ENSCAFP00805043827 |
SM-ATX |
PF14438 |
6.2e-19 |
3 |
ENSCAFP00805043861 |
LsmAD |
PF06741 |
6.5e-17 |
1 |
ENSCAFP00805043861 |
PAM2 |
PF07145 |
2.4e-05 |
2 |
ENSCAFP00805043861 |
SM-ATX |
PF14438 |
6.5e-19 |
3 |
ENSCAFP00805043853 |
LsmAD |
PF06741 |
6.6e-17 |
1 |
ENSCAFP00805043853 |
PAM2 |
PF07145 |
2.5e-05 |
2 |
ENSCAFP00805043853 |
SM-ATX |
PF14438 |
6.6e-19 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
ATXN2L-203 |
ENSCAFT00805055726 |
4138 |
1048aa |
ENSCAFP00805043827 |
ATXN2L-202 |
ENSCAFT00805055756 |
4771 |
1085aa |
ENSCAFP00805043853 |
ATXN2L-201 |
ENSCAFT00805055765 |
4303 |
1083aa |
ENSCAFP00805043861 |
ATXN2L-204 |
ENSCAFT00805055790 |
3971 |
991aa |
ENSCAFP00805043886 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSCAFG00805030623 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSCAFG00805030623 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |