Description

Ensembl ID ENSCAFG00805030623 Gene ID Accession -
Symbol ATXN2L Alias - Full Name NA
Status Confidence Length 12715 bases Strand Plus strand
Position 6 : 18508941 - 18521655 RNA binding domain LsmAD , PAM2 , SM-ATX
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCAFP00805043886 LsmAD PF06741 5.8e-17 1
ENSCAFP00805043886 PAM2 PF07145 2.2e-05 2
ENSCAFP00805043886 SM-ATX PF14438 5.8e-19 3
ENSCAFP00805043827 LsmAD PF06741 6.2e-17 1
ENSCAFP00805043827 PAM2 PF07145 2.3e-05 2
ENSCAFP00805043827 SM-ATX PF14438 6.2e-19 3
ENSCAFP00805043861 LsmAD PF06741 6.5e-17 1
ENSCAFP00805043861 PAM2 PF07145 2.4e-05 2
ENSCAFP00805043861 SM-ATX PF14438 6.5e-19 3
ENSCAFP00805043853 LsmAD PF06741 6.6e-17 1
ENSCAFP00805043853 PAM2 PF07145 2.5e-05 2
ENSCAFP00805043853 SM-ATX PF14438 6.6e-19 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
ATXN2L-203 ENSCAFT00805055726 4138 1048aa ENSCAFP00805043827
ATXN2L-202 ENSCAFT00805055756 4771 1085aa ENSCAFP00805043853
ATXN2L-201 ENSCAFT00805055765 4303 1083aa ENSCAFP00805043861
ATXN2L-204 ENSCAFT00805055790 3971 991aa ENSCAFP00805043886

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00805030623

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00805030623

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression