Description

Ensembl ID ENSCAFG00805024330 Gene ID Accession -
Symbol ATXN2 Alias - Full Name NA
Status Confidence Length 114816 bases Strand Minus strand
Position 26 : 9304829 - 9419644 RNA binding domain LsmAD , PAM2 , SM-ATX
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCAFP00805036014 LsmAD PF06741 2.6e-15 1
ENSCAFP00805036014 PAM2 PF07145 5.9e-06 2
ENSCAFP00805035982 LsmAD PF06741 2.7e-15 1
ENSCAFP00805035982 PAM2 PF07145 6.2e-06 2
ENSCAFP00805035982 SM-ATX PF14438 3.2e-20 3
ENSCAFP00805035934 LsmAD PF06741 2.9e-15 1
ENSCAFP00805035934 PAM2 PF07145 6.4e-06 2
ENSCAFP00805035934 SM-ATX PF14438 3.3e-20 3
ENSCAFP00805035858 LsmAD PF06741 4e-15 1
ENSCAFP00805035858 PAM2 PF07145 7.9e-06 2
ENSCAFP00805035858 SM-ATX PF14438 4.3e-20 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
ATXN2-204 ENSCAFT00805045751 4506 1306aa ENSCAFP00805035858
ATXN2-202 ENSCAFT00805045849 3822 1078aa ENSCAFP00805035934
ATXN2-203 ENSCAFT00805045914 3756 1056aa ENSCAFP00805035982
ATXN2-201 ENSCAFT00805045955 3606 1006aa ENSCAFP00805036014

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00805024330

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00805024330

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression