RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCAFG00805008411	Gene ID		Accession	-
Symbol	SF3A3	Alias	-	Full Name	NA
Status	Confidence	Length	24633 bases	Strand	Plus strand
Position	15 : 4667224 - 4691856	RNA binding domain	SF3a60_Prp9_C , SF3a60_bindingd
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCAFP00805012069	SF3a60_Prp9_C	PF11931	1e-54	1
ENSCAFP00805012069	SF3a60_bindingd	PF12108	1.7e-15	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
SF3A3-201	ENSCAFT00805015414	1700	501aa	ENSCAFP00805012069

Gene Model

Click here to download ENSCAFG00805008411's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCAFG00805008411's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCAFG00805008411

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCAFG00805008411

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression