Description

Ensembl ID ENSCAFG00040025476 Gene ID Accession -
Symbol Alias - Full Name pre-mRNA processing factor 40 homolog A
Status Confidence Length 60063 bases Strand Minus strand
Position 19 : 53879070 - 53939132 RNA binding domain FF
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCAFP00040041567 FF PF01846 1.6e-47 1
ENSCAFP00040041567 FF PF01846 1.6e-47 2
ENSCAFP00040041567 FF PF01846 1.6e-47 3
ENSCAFP00040041567 FF PF01846 1.6e-47 4
ENSCAFP00040041567 FF PF01846 1.6e-47 5
ENSCAFP00040041529 FF PF01846 3.6e-47 1
ENSCAFP00040041529 FF PF01846 3.6e-47 2
ENSCAFP00040041529 FF PF01846 3.6e-47 3
ENSCAFP00040041529 FF PF01846 3.6e-47 4
ENSCAFP00040041529 FF PF01846 3.6e-47 5
ENSCAFP00040041511 FF PF01846 3.1e-46 1
ENSCAFP00040041511 FF PF01846 3.1e-46 2
ENSCAFP00040041511 FF PF01846 3.1e-46 3
ENSCAFP00040041511 FF PF01846 3.1e-46 4
ENSCAFP00040041511 FF PF01846 3.1e-46 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSCAFT00040047553 4555 1321aa ENSCAFP00040041511
- ENSCAFT00040047571 3520 976aa ENSCAFP00040041529
- ENSCAFT00040047613 3246 874aa ENSCAFP00040041567

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00040025476

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00040025476

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression