Description

Ensembl ID ENSCAFG00040002151 Gene ID Accession -
Symbol Alias - Full Name tRNA methyltransferase 13 homolog
Status Confidence Length 22404 bases Strand Minus strand
Position 6 : 49878576 - 49900979 RNA binding domain TRM13 , zf-TRM13_CCCH , zf-U11-48K
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCAFP00040003517 TRM13 PF05206 7e-93 1
ENSCAFP00040003517 zf-TRM13_CCCH PF11722 9.8e-13 2
ENSCAFP00040003517 zf-U11-48K PF05253 6.9e-09 3
ENSCAFP00040003534 TRM13 PF05206 2.4e-38 1
ENSCAFP00040003534 zf-TRM13_CCCH PF11722 1.5e-13 2
ENSCAFP00040003534 zf-U11-48K PF05253 3.6e-09 3
ENSCAFP00040003566 zf-TRM13_CCCH PF11722 6.5e-14 1
ENSCAFP00040003566 zf-U11-48K PF05253 1.2e-09 2
ENSCAFP00040003555 zf-U11-48K PF05253 1.2e-09 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
TRMT13-201 ENSCAFT00040004105 1572 482aa ENSCAFP00040003517
TRMT13-202 ENSCAFT00040004124 873 290aa ENSCAFP00040003534
TRMT13-203 ENSCAFT00040004148 489 130aa ENSCAFP00040003555
TRMT13-204 ENSCAFT00040004162 333 110aa ENSCAFP00040003566

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00040002151

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00040002151

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression