| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSCAFG00040002151 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
tRNA methyltransferase 13 homolog |
| Status |
Confidence |
Length |
22404 bases |
Strand |
Minus strand |
| Position |
6 : 49878576 - 49900979 |
RNA binding domain |
TRM13 , zf-TRM13_CCCH , zf-U11-48K |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSCAFP00040003517 |
TRM13 |
PF05206 |
7e-93 |
1 |
| ENSCAFP00040003517 |
zf-TRM13_CCCH |
PF11722 |
9.8e-13 |
2 |
| ENSCAFP00040003517 |
zf-U11-48K |
PF05253 |
6.9e-09 |
3 |
| ENSCAFP00040003534 |
TRM13 |
PF05206 |
2.4e-38 |
1 |
| ENSCAFP00040003534 |
zf-TRM13_CCCH |
PF11722 |
1.5e-13 |
2 |
| ENSCAFP00040003534 |
zf-U11-48K |
PF05253 |
3.6e-09 |
3 |
| ENSCAFP00040003566 |
zf-TRM13_CCCH |
PF11722 |
6.5e-14 |
1 |
| ENSCAFP00040003566 |
zf-U11-48K |
PF05253 |
1.2e-09 |
2 |
| ENSCAFP00040003555 |
zf-U11-48K |
PF05253 |
1.2e-09 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| TRMT13-201 |
ENSCAFT00040004105 |
1572 |
482aa |
ENSCAFP00040003517 |
| TRMT13-202 |
ENSCAFT00040004124 |
873 |
290aa |
ENSCAFP00040003534 |
| TRMT13-203 |
ENSCAFT00040004148 |
489 |
130aa |
ENSCAFP00040003555 |
| TRMT13-204 |
ENSCAFT00040004162 |
333 |
110aa |
ENSCAFP00040003566 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSCAFG00040002151 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSCAFG00040002151 | | | | | | | | |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |