RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCAFG00040001742	Gene ID	479798	Accession	-
Symbol		Alias	-	Full Name	exportin 6
Status	Confidence	Length	101763 bases	Strand	Plus strand
Position	6 : 18503164 - 18604926	RNA binding domain	IBN_N , Xpo1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCAFP00040002817	IBN_N	PF03810	1e-08	1
ENSCAFP00040002817	Xpo1	PF08389	4.5e-24	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
XPO6-201	ENSCAFT00040003288	3980	1125aa	ENSCAFP00040002817

Gene Model

Click here to download ENSCAFG00040001742's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCAFG00040001742's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCAFG00040001742

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCAFG00040001742

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression