Description

Ensembl ID ENSCAFG00030022030 Gene ID 477133 Accession -
Symbol XRN2 Alias - Full Name 5'-3' exoribonuclease 2
Status Confidence Length 86030 bases Strand Minus strand
Position 24 : 2472443 - 2558472 RNA binding domain XRN_N
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCAFP00030035278 XRN_N PF03159 1.3e-102 1
ENSCAFP00030035554 XRN_N PF03159 2e-102 1
ENSCAFP00030035403 XRN_N PF03159 1.2e-81 1
ENSCAFP00030035403 XRN_N PF03159 1.2e-81 2
ENSCAFP00030035682 XRN_N PF03159 2.2e-66 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
XRN2-202 ENSCAFT00030040419 3005 950aa ENSCAFP00030035278
XRN2-203 ENSCAFT00030040560 2915 920aa ENSCAFP00030035403
XRN2-204 ENSCAFT00030040738 2897 914aa ENSCAFP00030035554
XRN2-201 ENSCAFT00030040886 2724 870aa ENSCAFP00030035682

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00030022030

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00030022030

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression