RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCAFG00030016247	Gene ID		Accession	-
Symbol	UBA52	Alias	-	Full Name	Canis lupus familiaris ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52), mRNA.
Status	Confidence	Length	2816 bases	Strand	Minus strand
Position	20 : 44524568 - 44527383	RNA binding domain	Ribosomal_L40e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCAFP00030026075	Ribosomal_L40e	PF01020	9.9e-33	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
UBA52-201	ENSCAFT00030029916	573	128aa	ENSCAFP00030026075

Gene Model

Click here to download ENSCAFG00030016247's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCAFG00030016247's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCAFG00030016247

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCAFG00030016247

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression