RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCAFG00030012545	Gene ID	475350	Accession	-
Symbol	PRPF38A	Alias	-	Full Name	pre-mRNA processing factor 38A
Status	Confidence	Length	14284 bases	Strand	Plus strand
Position	15 : 55901704 - 55915987	RNA binding domain	PRP38
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCAFP00030020250	PRP38	PF03371	2.1e-63	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSCAFT00030023220	1153	312aa	ENSCAFP00030020250

Gene Model

Click here to download ENSCAFG00030012545's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCAFG00030012545's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCAFG00030012545

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCAFG00030012545

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression