RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCAFG00030005581	Gene ID	100855927	Accession	-
Symbol	PRPF3	Alias	-	Full Name	pre-mRNA processing factor 3
Status	Confidence	Length	24442 bases	Strand	Plus strand
Position	17 : 59442957 - 59467398	RNA binding domain	PWI , PRP3
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCAFP00030008946	PWI	PF01480	1.4e-13	1
ENSCAFP00030008946	PRP3	PF08572	1.8e-75	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
PRPF3-201	ENSCAFT00030010218	2332	683aa	ENSCAFP00030008946

Gene Model

Click here to download ENSCAFG00030005581's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCAFG00030005581's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCAFG00030005581

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCAFG00030005581

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression