Description

Ensembl ID ENSCAFG00000017841 Gene ID Accession -
Symbol G3BP1 Alias - Full Name G3BP stress granule assembly factor 1
Status Confidence Length 105540 bases Strand Minus strand
Position 4 : 57301161 - 57406700 RNA binding domain NTF2 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCAFP00000067028 NTF2 PF02136 1.6e-32 1
ENSCAFP00000067028 RRM_1 PF00076 6.3e-08 2
ENSCAFP00000026322 NTF2 PF02136 1.7e-32 1
ENSCAFP00000054169 NTF2 PF02136 1.8e-32 1
ENSCAFP00000054169 RRM_1 PF00076 4.4e-13 2
ENSCAFP00000054602 NTF2 PF02136 1.9e-32 1
ENSCAFP00000054602 RRM_1 PF00076 4.6e-13 2
ENSCAFP00000054613 NTF2 PF02136 1.9e-32 1
ENSCAFP00000054613 RRM_1 PF00076 4.7e-13 2
ENSCAFP00000061737 NTF2 PF02136 2e-32 1
ENSCAFP00000061737 RRM_1 PF00076 5e-13 2
ENSCAFP00000072567 NTF2 PF02136 3e-24 1
ENSCAFP00000072567 RRM_1 PF00076 4.8e-13 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
G3BP1-201 ENSCAFT00000070618 1988 461aa ENSCAFP00000054602
G3BP1-202 ENSCAFT00000071539 1975 497aa ENSCAFP00000061737
G3BP1-203 ENSCAFT00000028303 1846 454aa ENSCAFP00000026322
G3BP1-204 ENSCAFT00000085592 2552 465aa ENSCAFP00000054613
G3BP1-205 ENSCAFT00000087945 3836 448aa ENSCAFP00000054169
G3BP1-206 ENSCAFT00000098742 2813 463aa ENSCAFP00000067028
G3BP1-207 ENSCAFT00000107011 2280 475aa ENSCAFP00000072567

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00000017841

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00000017841

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression