Description

Ensembl ID ENSCAFG00000016532 Gene ID Accession -
Symbol POLR2A Alias - Full Name RNA polymerase II subunit A
Status Confidence Length 25720 bases Strand Plus strand
Position 5 : 32541962 - 32567681 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3 , RNA_pol_Rpb1_R , RNA_pol_Rpb1_6 , RNA_pol_Rpb1_7
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCAFP00000037353 RNA_pol_Rpb1_4 PF05000 6.2e-38 1
ENSCAFP00000037353 RNA_pol_Rpb1_1 PF04997 8.5e-109 2
ENSCAFP00000037353 RNA_pol_Rpb1_5 PF04998 1.1e-100 3
ENSCAFP00000037353 RNA_pol_Rpb1_2 PF00623 2e-74 4
ENSCAFP00000037353 RNA_pol_Rpb1_3 PF04983 8.7e-50 5
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 6
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 7
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 8
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 9
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 10
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 11
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 12
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 13
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 14
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 15
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 16
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 17
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 18
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 19
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 20
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 21
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 22
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 23
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 24
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 25
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 26
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 27
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 28
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 29
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 30
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 31
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 32
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 33
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 34
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 35
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 36
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 37
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 38
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 39
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 40
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 41
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 42
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 43
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 44
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 45
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 46
ENSCAFP00000037353 RNA_pol_Rpb1_R PF05001 4e-28 47
ENSCAFP00000037353 RNA_pol_Rpb1_6 PF04992 3.7e-68 48
ENSCAFP00000037353 RNA_pol_Rpb1_7 PF04990 3.4e-54 49

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
POLR2A-201 ENSCAFT00000050029 6652 1970aa ENSCAFP00000037353

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00000016532

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00000016532

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression