RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCAFG00000013202	Gene ID		Accession	-
Symbol	SIDT2	Alias	-	Full Name	SID1 transmembrane family member 2
Status	Confidence	Length	15777 bases	Strand	Minus strand
Position	5 : 16449915 - 16465691	RNA binding domain	SID-1_RNA_chan
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCAFP00000019474	SID-1_RNA_chan	PF13965	2.9e-290	1
ENSCAFP00000074924	SID-1_RNA_chan	PF13965	7.5e-290	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
SIDT2-201	ENSCAFT00000098759	4684	853aa	ENSCAFP00000074924
SIDT2-202	ENSCAFT00000020974	4621	832aa	ENSCAFP00000019474

Gene Model

Click here to download ENSCAFG00000013202's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCAFG00000013202's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCAFG00000013202

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCAFG00000013202

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression