Description

Ensembl ID ENSCAFG00000012418 Gene ID Accession -
Symbol SSB Alias - Full Name small RNA binding exonuclease protection factor La
Status Confidence Length 12503 bases Strand Plus strand
Position 36 : 14477263 - 14489765 RNA binding domain RRM_3 , RRM_1 , La
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCAFP00000074482 RRM_3 PF08777 6.6e-32 1
ENSCAFP00000074482 RRM_1 PF00076 3.6e-14 2
ENSCAFP00000074482 La PF05383 1.6e-21 3
ENSCAFP00000034314 RRM_3 PF08777 2.2e-31 1
ENSCAFP00000034314 RRM_1 PF00076 4.4e-14 2
ENSCAFP00000034314 La PF05383 1.4e-21 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
SSB-201 ENSCAFT00000105055 2813 382aa ENSCAFP00000074482
SSB-202 ENSCAFT00000038572 2860 406aa ENSCAFP00000034314

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00000012418

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00000012418

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression