RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSCAFG00000009068 | Gene ID |
|
Accession |
- |
Symbol |
EXOSC1 |
Alias |
- |
Full Name |
exosome component 1 |
Status |
Confidence |
Length |
10733 bases |
Strand |
Minus strand |
Position |
28 : 10911190 - 10921922 |
RNA binding domain |
ECR1_N , EXOSC1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSCAFP00000065065 |
ECR1_N |
PF14382 |
1.5e-09 |
1 |
ENSCAFP00000067574 |
ECR1_N |
PF14382 |
2.5e-09 |
1 |
ENSCAFP00000074480 |
ECR1_N |
PF14382 |
5.2e-09 |
1 |
ENSCAFP00000074480 |
EXOSC1 |
PF10447 |
7e-13 |
2 |
ENSCAFP00000074269 |
ECR1_N |
PF14382 |
5.3e-09 |
1 |
ENSCAFP00000074269 |
EXOSC1 |
PF10447 |
3e-14 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
EXOSC1-202 |
ENSCAFT00000104149 |
3964 |
309aa |
ENSCAFP00000074269 |
EXOSC1-203 |
ENSCAFT00000108463 |
3889 |
284aa |
ENSCAFP00000074480 |
EXOSC1-201 |
ENSCAFT00000097098 |
3581 |
178aa |
ENSCAFP00000067574 |
EXOSC1-204 |
ENSCAFT00000087895 |
440 |
140aa |
ENSCAFP00000065065 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSCAFG00000009068 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSCAFG00000009068 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |