Description

Ensembl ID ENSCAFG00000009068 Gene ID Accession -
Symbol EXOSC1 Alias - Full Name exosome component 1
Status Confidence Length 10733 bases Strand Minus strand
Position 28 : 10911190 - 10921922 RNA binding domain ECR1_N , EXOSC1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCAFP00000065065 ECR1_N PF14382 1.5e-09 1
ENSCAFP00000067574 ECR1_N PF14382 2.5e-09 1
ENSCAFP00000074480 ECR1_N PF14382 5.2e-09 1
ENSCAFP00000074480 EXOSC1 PF10447 7e-13 2
ENSCAFP00000074269 ECR1_N PF14382 5.3e-09 1
ENSCAFP00000074269 EXOSC1 PF10447 3e-14 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
EXOSC1-202 ENSCAFT00000104149 3964 309aa ENSCAFP00000074269
EXOSC1-203 ENSCAFT00000108463 3889 284aa ENSCAFP00000074480
EXOSC1-201 ENSCAFT00000097098 3581 178aa ENSCAFP00000067574
EXOSC1-204 ENSCAFT00000087895 440 140aa ENSCAFP00000065065

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00000009068

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00000009068

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression