Description

Ensembl ID ENSCAFG00000007613 Gene ID Accession -
Symbol POLR1A Alias - Full Name RNA polymerase I subunit A
Status Confidence Length 70015 bases Strand Plus strand
Position 17 : 38686319 - 38756333 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCAFP00000050429 RNA_pol_Rpb1_4 PF05000 2.8e-25 1
ENSCAFP00000050429 RNA_pol_Rpb1_1 PF04997 1.1e-21 2
ENSCAFP00000050429 RNA_pol_Rpb1_5 PF04998 3.5e-89 3
ENSCAFP00000050429 RNA_pol_Rpb1_2 PF00623 6.8e-70 4
ENSCAFP00000050429 RNA_pol_Rpb1_3 PF04983 1.3e-36 5
ENSCAFP00000040891 RNA_pol_Rpb1_4 PF05000 3e-25 1
ENSCAFP00000040891 RNA_pol_Rpb1_1 PF04997 5.4e-23 2
ENSCAFP00000040891 RNA_pol_Rpb1_5 PF04998 1.1e-103 3
ENSCAFP00000040891 RNA_pol_Rpb1_2 PF00623 7.3e-70 4
ENSCAFP00000040891 RNA_pol_Rpb1_3 PF04983 1.5e-36 5
ENSCAFP00000011333 RNA_pol_Rpb1_4 PF05000 3.1e-25 1
ENSCAFP00000011333 RNA_pol_Rpb1_1 PF04997 1.3e-21 2
ENSCAFP00000011333 RNA_pol_Rpb1_5 PF04998 1.2e-103 3
ENSCAFP00000011333 RNA_pol_Rpb1_2 PF00623 7.4e-70 4
ENSCAFP00000011333 RNA_pol_Rpb1_3 PF04983 1.5e-36 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
POLR1A-201 ENSCAFT00000071612 5091 1636aa ENSCAFP00000050429
POLR1A-202 ENSCAFT00000012228 6035 1717aa ENSCAFP00000011333
POLR1A-203 ENSCAFT00000047500 5948 1688aa ENSCAFP00000040891

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00000007613

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00000007613

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression