RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSCAFG00000004422	Gene ID		Accession	-
Symbol	NSUN6	Alias	-	Full Name	NOP2/Sun RNA methyltransferase 6
Status	Confidence	Length	57374 bases	Strand	Plus strand
Position	2 : 15577688 - 15635061	RNA binding domain	Methyltransf_31 , Methyltr_RsmB-F , FtsJ
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSCAFP00000006600	Methyltransf_31	PF13847	5.7e-09	1
ENSCAFP00000006600	Methyltr_RsmB-F	PF01189	1.5e-45	2
ENSCAFP00000006600	FtsJ	PF01728	9.3e-08	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
NSUN6-201	ENSCAFT00000007127	2281	469aa	ENSCAFP00000006600

Gene Model

Click here to download ENSCAFG00000004422's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSCAFG00000004422's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCAFG00000004422

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSCAFG00000004422

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression