Description

Ensembl ID ENSCAFG00000003939 Gene ID Accession -
Symbol HBP1 Alias - Full Name HMG-box transcription factor 1
Status Confidence Length 28420 bases Strand Minus strand
Position 18 : 12988611 - 13017030 RNA binding domain AXH
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCAFP00000053355 AXH PF08517 2.1e-36 1
ENSCAFP00000005867 AXH PF08517 2.2e-36 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
HBP1-201 ENSCAFT00000006332 2678 522aa ENSCAFP00000005867
HBP1-202 ENSCAFT00000079799 2766 512aa ENSCAFP00000053355

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00000003939

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00000003939

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression