Description

Ensembl ID ENSCAFG00000001812 Gene ID Accession -
Symbol APTX Alias - Full Name aprataxin
Status Confidence Length 20613 bases Strand Minus strand
Position 11 : 48740433 - 48761045 RNA binding domain DcpS_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCAFP00000055979 DcpS_C PF11969 2.8e-34 1
ENSCAFP00000041257 DcpS_C PF11969 3.1e-34 1
ENSCAFP00000051773 DcpS_C PF11969 3.8e-34 1
ENSCAFP00000002638 DcpS_C PF11969 5.8e-34 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
APTX-203 ENSCAFT00000075258 2664 342aa ENSCAFP00000051773
APTX-201 ENSCAFT00000002845 2508 331aa ENSCAFP00000002638
APTX-202 ENSCAFT00000043374 2379 288aa ENSCAFP00000041257
APTX-204 ENSCAFT00000077001 1002 293aa ENSCAFP00000055979

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00000001812

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00000001812

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression