Description

Ensembl ID ENSCAFG00000000224 Gene ID Accession -
Symbol YTHDC2 Alias - Full Name YTH domain containing 2
Status Confidence Length 77326 bases Strand Plus strand
Position 11 : 3679762 - 3757087 RNA binding domain DEAD , R3H , HA2 , YTH , OB_NTP_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSCAFP00000074343 DEAD PF00270 1.9e-09 1
ENSCAFP00000074343 HA2 PF04408 5e-18 2
ENSCAFP00000074343 YTH PF04146 1.7e-42 3
ENSCAFP00000074343 YTH PF04146 1.7e-42 4
ENSCAFP00000074343 OB_NTP_bind PF07717 2.3e-11 5
ENSCAFP00000073931 DEAD PF00270 1.9e-09 1
ENSCAFP00000073931 R3H PF01424 1.3e-10 2
ENSCAFP00000073931 HA2 PF04408 5.1e-18 3
ENSCAFP00000073931 YTH PF04146 4.9e-22 4
ENSCAFP00000073931 OB_NTP_bind PF07717 2.2e-11 5
ENSCAFP00000000324 DEAD PF00270 2e-09 1
ENSCAFP00000000324 R3H PF01424 1.4e-10 2
ENSCAFP00000000324 HA2 PF04408 5.6e-18 3
ENSCAFP00000000324 YTH PF04146 2.3e-42 4
ENSCAFP00000000324 YTH PF04146 2.3e-42 5
ENSCAFP00000000324 OB_NTP_bind PF07717 2e-11 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
YTHDC2-201 ENSCAFT00000101618 5115 1333aa ENSCAFP00000074343
YTHDC2-202 ENSCAFT00000000357 4958 1429aa ENSCAFP00000000324
YTHDC2-203 ENSCAFT00000103340 4754 1361aa ENSCAFP00000073931

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00000000224

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSCAFG00000000224

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression